RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 TPMTP51580 245 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 RIDAP52758 137 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 CAPZA1P52907 286 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 PPP5CP53041 499 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 CASP6P55212 293 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 NUP107P57740 925 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 ARF5P84085 180 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 DDX39BQ13838 428 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 FLOT2Q14254 428 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 TMEM132DQ14C87 1099 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 C16orf72Q14CZ0 275 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 PRKD1Q15139 912 aaPredicted RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 PTPRRQ15256 657 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SURF1Q15526 300 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 CHRNA6Q15825 494 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 TSTQ16762 297 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 C2orf76Q3KRA6 126 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 PDSS1Q5T2R2 415 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 GARNL3Q5VVW2 1013 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SP5Q6BEB4 398 aaPredicted RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 HMBOX1Q6NT76 420 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SLC22A25Q6T423 547 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 HTR3DQ70Z44 454 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 FRA10AC1Q70Z53 315 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 CXXC5Q7LFL8 322 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 ZNF720Q7Z2F6 126 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 GDF7Q7Z4P5 450 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 CAMKMTQ7Z624 323 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 ERI1Q8IV48 349 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 TRIM48Q8IWZ4 208 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 RCOR2Q8IZ40 523 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SH2D3CQ8N5H7 860 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 UBL4BQ8N7F7 174 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 OR10T2Q8NGX3 314 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 WDR48Q8TAF3 677 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 TCP10LQ8TDR4 215 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 ADAMTS17Q8TE56 1095 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 CREB3L4Q8TEY5 395 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 HTR3CQ8WXA8 447 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 LARP4BQ92615 738 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 KAT5Q92993 513 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 YIPF5Q969M3 257 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SLC25A36Q96CQ1 311 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 KLHL29Q96CT2 875 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 ARHGEF26Q96DR7 871 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SENP8Q96LD8 212 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 C5orf34Q96MH7 638 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 MSTO1Q9BUK6 570 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SLC25A23Q9BV35 468 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SF3B5Q9BWJ5 86 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 TWSG1Q9GZX9 223 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 SLC22A4Q9H015 551 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 LRMDAQ9H2I8 198 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 TP63Q9H3D4 680 aaPredicted RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 RIMS4Q9H426 269 aaPredicted RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 EPB41L5Q9HCM4 733 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 OBP2BQ9NPH6 170 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 C19orf12Q9NSK7 152 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 THUMPD1Q9NXG2 353 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 DEC1Q9P2X7 70 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 POU2F3Q9UKI9 436 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 PLCL2Q9UPR0 1127 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 B3GNT3Q9Y2A9 372 aa4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 UTP11Q9Y3A2 253 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 ZNF638Q14966 1978 aaKnown RBP4.99□□□□□ -1.61
TSPAN8-202ENST00000393330 PRSS38A1L453 326 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 XKRY2A2RUG3 117 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 TMEM200CA6NKL6 621 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 KCNJ18B7U540 433 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 H0YAE9 185 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 DENRO43583 198 aaKnown RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 CCNT2O60583 730 aaKnown RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 TRIM3O75382 744 aaPredicted RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 TRMUO75648 421 aaKnown RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 APOL3O95236 402 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 IL18RAPO95256 599 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 PGLSO95336 258 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 NSA2O95478 260 aaKnown RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 MBP02144 154 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 FTLP02792 175 aaPredicted RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 STSP08842 583 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 ZCCHC18P0CG32 403 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 CSH1P0DML2 217 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 CSH2P0DML3 217 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 TMIGD3P0DMS9 266 aaPredicted RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 TNNI3P19429 210 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 EEF1DP29692 281 aaKnown RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 SPAM1P38567 509 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 LEPRP48357 1165 aaKnown RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 ARCN1P48444 511 aaKnown RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 RASSF2P50749 326 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 GBX2P52951 348 aaPredicted RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 SEC24CP53992 1094 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 BCAT1P54687 386 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 KCNJ2P63252 427 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 CDK16Q00536 496 aa4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 FLI1Q01543 452 aaPredicted RBP4.98□□□□□ -1.61
TSPAN8-202ENST00000393330 GAD2Q05329 585 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms