RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CRY2Q49AN0 593 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ARMCX4Q5H9R4 360 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 CELF3Q5SZQ8 465 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 HYIQ5T013 277 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 KHDRBS2Q5VWX1 349 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 MZT2BQ6NZ67 158 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 NHLRC1Q6VVB1 395 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF600Q6ZNG1 722 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 TIFABQ6ZNK6 161 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 IL17RELQ6ZVW7 336 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 COX8CQ7Z4L0 72 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 GPR141Q7Z602 305 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 PRPF39Q86UA1 669 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 HSCBQ8IWL3 235 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ZC3H3Q8IXZ2 948 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 DND1Q8IYX4 353 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF444Q8N0Y2 327 aaPredicted RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 TMEM99Q8N816 258 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 SAMD12Q8N8I0 201 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 CLEC1AQ8NC01 280 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ICA1LQ8NDH6 482 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 OR13C5Q8NGS8 318 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 TBCKQ8TEA7 893 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 TCP11Q8WWU5 503 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 EXT2Q93063 718 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 P2RX5Q93086 422 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF274Q96GC6 653 aaPredicted RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF799Q96GE5 643 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 RBM41Q96IZ5 413 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 TSSK2Q96PF2 358 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 RCHY1Q96PM5 261 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 OR5M11Q96RB7 305 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 MCCC1Q96RQ3 725 aaPredicted RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 PI4K2AQ9BTU6 479 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 GPR88Q9GZN0 384 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ZBP1Q9H171 429 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 MTIF3Q9H2K0 278 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 UBQLN3Q9H347 655 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 S100A14Q9HCY8 104 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 AMBNQ9NP70 447 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 KCNMB3Q9NPA1 279 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 MYOZ2Q9NPC6 264 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 IARS2Q9NSE4 1012 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 ABCC13Q9NSE7 274 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 VNN3Q9NY84 501 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 UBQLN2Q9UHD9 624 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 NIP7Q9Y221 180 aaKnown RBP eCLIP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 EXOC6BQ9Y2D4 811 aa0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 TDRD6O60522 2096 aaKnown RBP0.95□□□□□ -2.26
SNORD28B-201ENST00000390993 RALGAPA1Q6GYQ0 2036 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 ARID2Q68CP9 1835 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 NEDD4P46934 1319 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 COL16A1Q07092 1604 aaPredicted RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 FER1L5A0AVI2 2057 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 TRAV9-2A0A087WT02 112 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 KLF18A0A0U1RQI7 1052 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 A0A1W2PPM1 405 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 LOC390937A0A1W2PQ73 354 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 NEDD8-MDP1E9PL57 170 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 MCF2LO15068 1137 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 PRDM1O75626 825 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 WDHD1O75717 1129 aaPredicted RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 CELF2O95319 508 aaKnown RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 GGPS1O95749 300 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 ANGPTL1O95841 491 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 PRB2P02812 416 aaPredicted RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 GSTA2P09210 222 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 SNRPCP09234 159 aaKnown RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 OR52Z1P0C646 297 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 KRT3P12035 628 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 P4HA1P13674 534 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 CD59P13987 128 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 PGAM2P15259 253 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF32P17041 273 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 MAGEA9P43362 315 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 CRKLP46109 303 aaKnown RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 MEOX2P50222 304 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 SLC25A1P53007 311 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 UCNP55089 124 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 PSMC6P62333 389 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 ABRQ12979 859 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 ABRAXAS2Q15018 415 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 KIAA0040Q15053 153 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 IQCCQ4KMZ1 466 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 TCP11X2Q5H9J9 407 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 DDI2Q5TDH0 399 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 MFSD4BQ5TF39 518 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF658Q5TYW1 1059 aaPredicted RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 TATDN1Q6P1N9 297 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 MOXD1Q6UVY6 613 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 PAMR1Q6UXH9 720 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 C2orf66Q6UXQ4 117 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 CHST3Q7LGC8 479 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 NUFIP2Q7Z417 695 aaKnown RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 DZIP1Q86YF9 867 aaKnown RBP0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 SLC22A18ASQ8N1D0 253 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 SLC43A2Q8N370 569 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF781Q8N8C0 355 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 RNF149Q8NC42 400 aa0.94□□□□□ -2.26
SNORD28B-201ENST00000390993 OR6T1Q8NGN1 323 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms