RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DTWD2Q8NBA8 298 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 OR10A6Q8NH74 314 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 BAHD1Q8TBE0 780 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 FAM81AQ8TBF8 368 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 PPCDCQ96CD2 204 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ELF4Q99607 663 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 KCTD14Q9BQ13 255 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 TRIM4Q9C037 500 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 DDX31Q9H8H2 851 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 PRDM7Q9NQW5 492 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 FAM120CQ9NX05 1096 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 PILRAQ9UKJ1 303 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 POMT2Q9UKY4 750 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 A0A0A6YYD5 115 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ERN1O75460 977 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 PROS1P07225 676 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 CTSBP07858 339 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ZNF888P0CJ79 500 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 GIMD1P0DJR0 217 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ATP6V1B2P21281 511 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 CDH3P22223 829 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 CERS1P27544 350 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ALDH4A1P30038 563 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 PDE7AQ13946 482 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 DEFB110Q30KQ9 67 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 LPCAT4Q643R3 524 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 OGFOD3Q6PK18 319 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 FAM92BQ6ZTR7 304 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 CEP68Q76N32 757 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 CAMKMTQ7Z624 323 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 OR2L5Q8NG80 312 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 OR8J3Q8NGG0 315 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ZCCHC10Q8TBK6 192 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 STARD8Q92502 1023 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ZUFSPQ96AP4 578 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 PRPF18Q99633 342 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 ECSITQ9BQ95 431 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 TBCDQ9BTW9 1192 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 SLC6A16Q9GZN6 736 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 FAM60AQ9NP50 221 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 MIEF1Q9NQG6 463 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 STARD5Q9NSY2 213 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 PCDHGA2Q9Y5H1 932 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 RNF215Q9Y6U7 377 aa11.6□□□□□ -0.55
SPTBN1-203ENST00000389980 C15orf38-AP3S2A0A0A6YYH1 394 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 PRSS51A0A1B0GVH4 220 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 H0YGG7 62 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 IMPDH2P12268 514 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 GFERP55789 205 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 EEFSECP57772 596 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 ARF3P61204 181 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 SLAMF1Q13291 335 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 LPAL2Q16609 132 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 LRRC23Q53EV4 343 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 TMEM35AQ53FP2 167 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 ARPINQ7Z6K5 226 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 DHFR2Q86XF0 187 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 SLC35F3Q8IY50 421 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 ACOT4Q8N9L9 421 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 PNPT1Q8TCS8 783 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 JADE3Q92613 823 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 QRFPRQ96P65 431 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 GBP5Q96PP8 586 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 KCNC2Q96PR1 638 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 MAP3K3Q99759 626 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 ZFYVE21Q9BQ24 234 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 ERVMER34-1Q9H9K5 563 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 LRIT1Q9P2V4 623 aa11.59□□□□□ -0.55
SPTBN1-203ENST00000389980 SLC9B1P1A6NJY1 282 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 GLOD5A6NK44 160 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 RHPN2P1A8MT19 583 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 PATE3B3GLJ2 98 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 H3BNX3 289 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 C6orf47O95873 294 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 CFIP05156 583 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 HIST1H1TP22492 207 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 ATP5A1P25705 553 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 GSTM2P28161 218 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 MAGEA8P43361 318 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 CAPZBP47756 277 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 BTN3A2P78410 334 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 TRAP1Q12931 704 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 C6orf132Q5T0Z8 1188 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 TRIM40Q6P9F5 258 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 AAGABQ6PD74 315 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 PRR23BQ6ZRT6 265 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 MSANTD1Q6ZTZ1 278 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 R3HCC1LQ7Z5L2 792 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 SPPL2CQ8IUH8 684 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 OR2I1PQ8NGU4 316 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 LZICQ8WZA0 190 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 TM4SF19Q96DZ7 209 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 CCDC115Q96NT0 180 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 CPPED1Q9BRF8 314 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 BHLHE41Q9C0J9 482 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 SCOCQ9UIL1 159 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 FBXW2Q9UKT8 454 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 MRPS2Q9Y399 296 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms