RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TMEM168Q9H0V1 697 aa12.57□□□□□ -0.4
PTPRN2-202ENST00000389416 NECTIN3Q9NQS3 549 aa12.57□□□□□ -0.4
PTPRN2-202ENST00000389416 HCN2Q9UL51 889 aa12.57□□□□□ -0.4
PTPRN2-202ENST00000389416 LOXHD1Q8IVV2 1947 aa12.57□□□□□ -0.4
PTPRN2-202ENST00000389416 GFRA2O00451 464 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 H1F0P07305 194 aaKnown RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 MMP2P08253 660 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 PRKACGP22612 351 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 SHC2P98077 582 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 CCINQ13939 588 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 LILRA6Q6PI73 481 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 DPH2Q9BQC3 489 aaPredicted RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 IFT27Q9BW83 186 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 MARK1Q9P0L2 795 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 RHCGQ9UBD6 479 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 NKX1-2Q9UD57 310 aaPredicted RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 YBX2Q9Y2T7 364 aaKnown RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 MAU2Q9Y6X3 613 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 SMIM31A0A1B0GVY4 71 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 C1orf226A1L170 272 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 SCDO00767 359 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 NPPAP01160 153 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 KRT8P05787 483 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 HEXBP07686 556 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 HNRNPCP07910 306 aaKnown RBP eCLIP12.56□□□□□ -0.41e-6■■■■□ 21.8
PTPRN2-202ENST00000389416 FHP07954 510 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 FGF4P08620 206 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 ANXA8P13928 327 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 DAG1Q14118 895 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 DGUOKQ16854 277 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 CYBRD1Q53TN4 286 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 OR4C6Q8NH72 309 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 PYURFQ96I23 114 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 FCRL4Q96PJ5 515 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 VN1R3Q9BXE9 311 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 RDH14Q9HBH5 336 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 ACTR10Q9NZ32 417 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 RAB26Q9ULW5 256 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 C1orf105O95561 183 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 C9P02748 559 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 MYBPC1Q00872 1141 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 CACTIN-AS1Q8N1I8 211 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 ZNF527Q8NB42 609 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 UBXN10Q96LJ8 280 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 A0A096LPI6 279 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 MED26O95402 600 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 SYPP08247 313 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 LINGO3P0C6S8 592 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 RNF144AP50876 292 aaPredicted RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 ADARP55265 1226 aaKnown RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 HTRA4P83105 476 aaPredicted RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 BNC1Q01954 994 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 CEACAM7Q14002 265 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 SPANXN2Q5MJ10 180 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 TMEM107Q6UX40 140 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 RNF175Q8N4F7 328 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 CHCHD4Q8N4Q1 142 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 CDADC1Q9BWV3 514 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 TPK1Q9H3S4 243 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 SERHL2Q9H4I8 314 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 MKKSQ9NPJ1 570 aaPredicted RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 SERHLQ9NQF3 203 aa12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 MRPS7Q9Y2R9 242 aaKnown RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 DNMT3AQ9Y6K1 912 aaPredicted RBP12.56□□□□□ -0.4
PTPRN2-202ENST00000389416 RGS10O43665 173 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 F3P13726 295 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 UQCRC2P22695 453 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 ACSL1P33121 698 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 C16orf72Q14CZ0 275 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 CDKL4Q5MAI5 379 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 NEK10Q6ZWH5 1172 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 NUP43Q8NFH3 380 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 C1GALT1C1Q96EU7 318 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 IL4I1Q96RQ9 567 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 MRPS26Q9BYN8 205 aaKnown RBP12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 KLRF1Q9NZS2 232 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 CPNE7Q9UBL6 633 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 SARDHQ9UL12 918 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 GABRA3P34903 492 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 GRM7Q14831 915 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 SLC30A6Q6NXT4 461 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 LIMS2Q7Z4I7 341 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 C6orf120Q7Z4R8 191 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 CCDC103Q8IW40 242 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 KBTBD2Q8IY47 623 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 IL22RA1Q8N6P7 574 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 GATSQ8NAP1 163 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 ZHX1-C8orf76Q96EF9 292 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 INSM2Q96T92 566 aaPredicted RBP12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 WDR83Q9BRX9 315 aaKnown RBP12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 SORBS1Q9BX66 1292 aaKnown RBP12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 CHRM5P08912 532 aaPredicted RBP12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 ZNF24P17028 368 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 DNAJA1P31689 397 aaKnown RBP12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 CAPGP40121 348 aa12.55□□□□□ -0.4
PTPRN2-202ENST00000389416 GRIK2Q13002 908 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms