RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 MAPK3P27361 379 aaPredicted RBP4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 GJB2P29033 226 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 FEN1P39748 380 aaKnown RBP4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 MMP12P39900 470 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 SLC12A3P55017 1021 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 YBEYP58557 167 aaPredicted RBP4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 GNB1P62873 340 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 CSNK2BP67870 215 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCDC40Q4G0X9 1142 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 PARP10Q53GL7 1025 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 BSPRYQ5W0U4 402 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 ARHGAP11AQ6P4F7 1023 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 Q71RC1 249 aaPredicted RBP4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 NLRP14Q86W24 1093 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 DCLK2Q8N568 766 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCDC197Q8NCU1 140 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 HCAR2Q8TDS4 363 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 SMPDL3AQ92484 453 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 PRCCQ92733 491 aaPredicted RBP4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 DTD2Q96FN9 168 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 USP28Q96RU2 1077 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 SYT15Q9BQS2 421 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 WWTR1Q9GZV5 400 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 ZNF665Q9H7R5 613 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 DCLRE1BQ9H816 532 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 SYTL2Q9HCH5 934 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 TRIM10Q9UDY6 481 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 LRP12Q9Y561 859 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 ZHX2Q9Y6X8 837 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 UMODL1Q5DID0 1318 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 TLR4O00206 839 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 EEF2KO00418 725 aaKnown RBP4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCSO14618 274 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 B4GAT1O43505 415 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 ECE2O60344 883 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 REC8O95072 547 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 STBD1O95210 358 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 IGLV1-44P01699 117 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SLC4A1P02730 911 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 LYNP07948 512 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 AHCYP23526 432 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 GPR183P32249 361 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SLC6A12P48065 614 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 GEMP55040 296 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 ABCE1P61221 599 aaKnown RBP4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 CYCSP99999 105 aaKnown RBP4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 GABPAQ06546 454 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 GK2Q14410 553 aaPredicted RBP4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 TOR1AIP1Q5JTV8 583 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SPANXN4Q5MJ08 99 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 ADAMTSL4-AS1Q5T5F5 129 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 PLPP4Q5VZY2 271 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 CES4AQ5XG92 561 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 ARHGAP17Q68EM7 881 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 BHLHB9Q6PI77 547 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SLC22A15Q8IZD6 547 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 HDDC3Q8N4P3 179 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCNYQ8ND76 341 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 ANKRD20A12PQ8NF67 263 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 UBTD2Q8WUN7 234 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 DNASE2BQ8WZ79 361 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 WBP2Q969T9 261 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SLCO4A1Q96BD0 722 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 NSMCE2Q96MF7 247 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SPATA13Q96N96 652 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 KRT12Q99456 494 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SSX3Q99909 188 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 PKP2Q99959 881 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 NTMT1Q9BV86 223 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 PAPOLGQ9BWT3 736 aaKnown RBP4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 BARHL1Q9BZE3 327 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 XPO4Q9C0E2 1151 aaKnown RBP4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 TRPV6Q9H1D0 765 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 C1orf21Q9H246 121 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 MED20Q9H944 212 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 FGF22Q9HCT0 170 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 B3GAT2Q9NPZ5 323 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SPHK2Q9NRA0 654 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 PIGVQ9NUD9 493 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 PLCXD1Q9NUJ7 323 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 ACOXLQ9NUZ1 547 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 PILRAQ9UKJ1 303 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCPG1Q9ULG6 757 aa4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 RPH3AQ9Y2J0 694 aaPredicted RBP4.69□□□□□ -1.66
RNU6-40P-201ENST00000384254 SIGLEC5O15389 551 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 MTRF1O75570 445 aaKnown RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CEACAM4O75871 244 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 FGF19O95750 216 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 EPOP01588 193 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 PTMAP06454 111 aaKnown RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 SERPINF2P08697 491 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CT45A8P0DMV1 189 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CT45A9P0DMV2 189 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CYP3A5P20815 502 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 OPRL1P41146 370 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 HNRNPFP52597 415 aaKnown RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 SRP54P61011 504 aaKnown RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCZ1BP86790 482 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCZ1P86791 482 aaPredicted RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 DHODHQ02127 395 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms