RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TCAIMQ8N3R3 496 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 CPA6Q8N4T0 437 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 RASGEF1AQ8N9B8 481 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 LYSMD1Q96S90 227 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 ACAT2Q9BWD1 397 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 RUVBL1Q9Y265 456 aaKnown RBP15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 K7ESM1 405 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 KMOO15229 486 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 SGTAO43765 313 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 GABRB1P18505 474 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 S100A5P33763 92 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 WASP42768 502 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 DGKGP49619 791 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 C10orf62Q5T681 223 aaPredicted RBP15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 C11orf65Q8NCR3 313 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 OR4C15Q8NGM1 316 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 HUS1BQ8NHY5 278 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 IL36AQ9UHA7 158 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 PCDHGA3Q9Y5H0 932 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 ISPDA4D126 451 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 TAF4O00268 1085 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 MRPS14O60783 128 aaKnown RBP15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 CASP3P42574 277 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 DHCR24Q15392 516 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 TSTQ16762 297 aaKnown RBP15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 CDKL4Q5MAI5 379 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 NRTNQ99748 197 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 CTRCQ99895 268 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 CPEB1Q9BZB8 566 aaKnown RBP15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 HOXD1Q9GZZ0 328 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 CRISPLD2Q9H0B8 497 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 IMPAD1Q9NX62 359 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 PRKAG2Q9UGJ0 569 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 DUSP12Q9UNI6 340 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 MAP4K5Q9Y4K4 846 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 PCDHGB6Q9Y5F9 930 aa15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 HELZP42694 1942 aaKnown RBP15.57■□□□□ 0.08
NKX3-1-201ENST00000380871 NPIPB8E9PQR5 432 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 KIAA0513O60268 411 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 CYP7B1O75881 506 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 C6orf47O95873 294 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 SLC16A8O95907 504 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 PCGF2P35227 344 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 CSTF3Q12996 717 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 DMC1Q14565 340 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 PNCKQ6P2M8 343 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 SDHCQ99643 169 aaPredicted RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 OR2AG1Q9H205 316 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 IL23AQ9NPF7 189 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 MGAT4DA6NG13 374 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 AP3D1O14617 1153 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 ASNA1O43681 348 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 POU1F1P28069 291 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 TGM4P49221 684 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 RPS13P62277 151 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 TMEM115Q12893 351 aaPredicted RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 FNDC3BQ53EP0 1204 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 TRMT11Q7Z4G4 463 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 SH2B3Q9UQQ2 575 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 PRAMEF33A0A0G2JMD5 474 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 PRR23AA6NEV1 266 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 HAT1O14929 419 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 PRAMEF10O60809 474 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 MMP20O60882 483 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 FEN1P39748 380 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 UGT2B15P54855 530 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 LEXMQ3ZCV2 418 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 BRAT1Q6PJG6 821 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 AGTRAPQ6RW13 159 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 PARS2Q7L3T8 475 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 TMPRSS11BQ86T26 416 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 MMP21Q8N119 569 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 OR7G3Q8NG95 312 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 SPPL3Q8TCT6 385 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 NXPE3Q969Y0 559 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 FAM129BQ96TA1 746 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 NXF2Q9GZY0 626 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 PLCXD1Q9NUJ7 323 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 FBXL12Q9NXK8 326 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 ATG2BQ96BY7 2078 aa15.56■□□□□ 0.08
NKX3-1-201ENST00000380871 SAGE2PA6NJ88 616 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 H3BM21 787 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 ADAMDEC1O15204 470 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 LZTS3O60299 673 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 PRMT3O60678 531 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 LINC00271P0C7V0 271 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 PIK3CBP42338 1070 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 MICAQ29983 383 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 LIPJQ5W064 366 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 COL21A1Q96P44 957 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 SLC35A5Q9BS91 424 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 ANKHQ9HCJ1 492 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 IGFBP1P08833 259 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 HNRNPFP52597 415 aaKnown RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 LIMK1P53667 647 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 PTGES3Q15185 160 aaKnown RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 TCEA2Q15560 299 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 PRSS53Q2L4Q9 553 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 RAET1GQ6H3X3 334 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 NEK10Q6ZWH5 1172 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms