RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PAQR7Q86WK9 346 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 DEFB119Q8N690 84 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 POP5Q969H6 163 aaKnown RBP18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 SLC6A18Q96N87 628 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 OR2A14Q96R47 310 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 SPATA9Q9BWV2 254 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 MAGIXQ9H6Y5 334 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 C5AR2Q9P296 337 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 ZNF639Q9UID6 485 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 CCDC88CQ9P219 2028 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 C4orf51C9J302 202 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 DLGAP1O14490 977 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 FOSL2P15408 326 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 ZNF23P17027 643 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 CRATP43155 626 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 GSTM5P46439 218 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 STARD6P59095 220 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 VEZF1Q14119 521 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 NHSL2Q5HYW2 709 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 TAF8Q7Z7C8 310 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 GALNT10Q86SR1 603 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 EID3Q8N140 333 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 MFSD2AQ8NA29 543 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 OR5AK3PQ8NH89 298 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 UCN3Q969E3 161 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 MAL2Q969L2 176 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 TWSG1Q9GZX9 223 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 PRDM7Q9NQW5 492 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 CPNE7Q9UBL6 633 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 RAPGEFL1Q9UHV5 662 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 FBXL21Q9UKT6 434 aa18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 SAMD4AQ9UPU9 718 aaKnown RBP18.89■□□□□ 0.61
PDLIM5-205ENST00000380180 OR6C74A6NCV1 312 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 EI24O14681 340 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 ZW10O43264 779 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 ERI3O43414 337 aaKnown RBP18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 ZNF682O95780 498 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 CST1P01037 141 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 POLR2CP19387 275 aaPredicted RBP18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 CHN2P52757 468 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 TRA2BP62995 288 aaKnown RBP18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 TOR1AIP1Q5JTV8 583 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 TMEM214Q6NUQ4 689 aaKnown RBP18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 ABHD17CQ6PCB6 329 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 TBPL2Q6SJ96 375 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 ZFPM2Q8WW38 1151 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 TMBIM1Q969X1 311 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 SLAMF7Q9NQ25 335 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 C8orf4Q9NR00 106 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 WNT16Q9UBV4 365 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 ACSL6Q9UKU0 697 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 FAF1Q9UNN5 650 aaPredicted RBP18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 ETFAP13804 333 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 CTSEP14091 401 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 C1orf61Q13536 156 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 SLC5A12Q1EHB4 618 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 TJAP1Q5JTD0 557 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 TRIM73Q86UV7 250 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 OR2L5Q8NG80 312 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 OR52N2Q8NGI0 321 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 OR10G6Q8NH81 332 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 EXOSC8Q96B26 276 aaKnown RBP18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 FCRL4Q96PJ5 515 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 KCNC2Q96PR1 638 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 DNAJB9Q9UBS3 223 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 PCDHGA2Q9Y5H1 932 aa18.88■□□□□ 0.61
PDLIM5-205ENST00000380180 PDPK1O15530 556 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 FAM58BPP0C7Q3 252 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 UGT2B7P16662 529 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 CHI3L1P36222 383 aaPredicted RBP18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 MANFP55145 182 aaKnown RBP18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 VAC14Q08AM6 782 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 CHERPQ8IWX8 916 aaKnown RBP18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 NATD1Q8N6N6 113 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 OR8K5Q8NH50 307 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 SHDQ96IW2 340 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 CXorf36Q9H7Y0 433 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 POT1Q9NUX5 634 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 APOBEC3BQ9UH17 382 aaKnown RBP18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 SCN2AQ99250 2005 aa18.87■□□□□ 0.61
PDLIM5-205ENST00000380180 GSAPA4D1B5 854 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 A6NHS1 94 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 NDUFS2O75306 463 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 TNFRSF21O75509 655 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 MAGP20916 626 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 HIST1H1TP22492 207 aaPredicted RBP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SOAT1P35610 550 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 PCBP4P57723 403 aaKnown RBP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 RPS15AP62244 130 aaKnown RBP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 UBE2IP63279 158 aaKnown RBP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SLAMF1Q13291 335 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SLC9A5Q14940 896 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 NDUFAF5Q5TEU4 345 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 FBXO42Q6P3S6 717 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 RNF130Q86XS8 419 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SIX5Q8N196 739 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 ACOT4Q8N9L9 421 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 MAGEE2Q8TD90 523 aaPredicted RBP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SLC37A2Q8TED4 501 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 TMEM121BQ9BXQ6 578 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms