RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PTOV1Q86YD1 416 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 OR52E4Q8NGH9 312 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 KCNC2Q96PR1 638 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 OR2A5Q96R48 311 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 DPH2Q9BQC3 489 aaPredicted RBP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 CD320Q9NPF0 282 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 PILRAQ9UKJ1 303 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 ENTPD2Q9Y5L3 495 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 CACNA1IQ9P0X4 2223 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 A0A1W2PRB8 838 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 FAM149AA5PLN7 773 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 PRAMEF10O60809 474 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 CREG1O75629 220 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 BMP2P12643 396 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 PVRP15151 417 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 HIST1H1TP22492 207 aaPredicted RBP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 ARFIP1P53367 373 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 MVDP53602 400 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 MAZP56270 477 aaKnown RBP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 NXPH1P58417 271 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 TRA2BP62995 288 aaKnown RBP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 SNRPNP63162 240 aaKnown RBP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 C16orf72Q14CZ0 275 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 ELOCQ15369 112 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 CPZQ66K79 652 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 ENPP6Q6UWR7 440 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 DGLUCYQ7Z3D6 616 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 ACOT4Q8N9L9 421 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 KCT2Q8NC54 265 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 LMX1AQ8TE12 382 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 GPATCH2Q9NW75 528 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 TAS2R9Q9NYW1 312 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 DLGAP2Q9P1A6 1054 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 PCDHGB4Q9UN71 923 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 KLK4Q9Y5K2 254 aa16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 TP53BP1Q12888 1972 aaPredicted RBP16.5■□□□□ 0.23
THUMPD2-201ENST00000378727 MT-ND1P03886 318 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 NTRK1P04629 796 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 FAM58BPP0C7Q3 252 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 RAB8AP61006 207 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 RGNQ15493 299 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 NKG7Q16617 165 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 SLC5A12Q1EHB4 618 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 MRM1Q6IN84 353 aaKnown RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ZNF438Q7Z4V0 828 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ASPGQ86U10 573 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 RBM12BQ8IXT5 1001 aaKnown RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 CATSPER1Q8NEC5 780 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 DNASE2BQ8WZ79 361 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 RSC1A1Q92681 617 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 NCLNQ969V3 563 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 FAM162AQ96A26 154 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 TM4SF19Q96DZ7 209 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ZNF764Q96H86 408 aaPredicted RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 SLC35A5Q9BS91 424 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 DCAF13Q9NV06 445 aaKnown RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 THEGQ9P2T0 379 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 LRCH1Q9Y2L9 728 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ASB4Q9Y574 426 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 AK5Q9Y6K8 562 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 VCANP13611 3396 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 A0A0J9YVX5 310 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 OR5K3A6NET4 321 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 RETP07949 1114 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 NUDT7P0C024 238 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ZNF26P17031 533 aaPredicted RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 PPIBP23284 216 aaKnown RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 CSNK1EP49674 416 aaKnown RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 PCBP4P57723 403 aaKnown RBP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 SLAMF1Q13291 335 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 VMACQ2NL98 169 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 TRIM40Q6P9F5 258 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ANKFN1Q8N957 763 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 FBXO30Q8TB52 745 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 NT5CQ8TCD5 201 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 EME1Q96AY2 570 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 RNF145Q96MT1 663 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 CHID1Q9BWS9 393 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ANKMY1Q9P2S6 941 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 ACSL6Q9UKU0 697 aa16.49■□□□□ 0.23
THUMPD2-201ENST00000378727 P2RX6O15547 441 aa16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 PRKRAO75569 313 aaKnown RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 PDGFBP01127 241 aaPredicted RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 TYRP1P17643 537 aa16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 FASP25445 335 aa16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 CERS1P27544 350 aa16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 FRKP42685 505 aaPredicted RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 STXBP1P61764 594 aaKnown RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 SLC9A5Q14940 896 aa16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 NDUFAF5Q5TEU4 345 aa16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 TSSK4Q6SA08 328 aa16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 ZCCHC7Q8N3Z6 543 aaKnown RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 BAHD1Q8TBE0 780 aaPredicted RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 DUSP15Q9H1R2 295 aaPredicted RBP16.48■□□□□ 0.23
THUMPD2-201ENST00000378727 CORO2BQ9UQ03 480 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms