RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PRMT9Q6P2P2 845 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 AGTRAPQ6RW13 159 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 ISLR2Q6UXK2 745 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 OR4N4Q8N0Y3 316 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 OR56A3Q8NH54 315 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 STON2Q8WXE9 905 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 RERGQ96A58 199 aaPredicted RBP13.02□□□□□ -0.33
PRPF18-202ENST00000378572 ESAMQ96AP7 390 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 FAR2Q96K12 515 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 NSUN5Q96P11 429 aaKnown RBP13.02□□□□□ -0.33
PRPF18-202ENST00000378572 RABEP2Q9H5N1 569 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 MRPS30Q9NP92 439 aaKnown RBP13.02□□□□□ -0.33
PRPF18-202ENST00000378572 TRPC4Q9UBN4 977 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 ASB1Q9Y576 335 aa13.02□□□□□ -0.33
PRPF18-202ENST00000378572 DOPEY1Q5JWR5 2465 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 NSG1A0A0A6YYJ2 146 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 FITM1A5D6W6 292 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 MED26O95402 600 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 SLC16A8O95907 504 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 HPP00738 406 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 ZGLP1P0C6A0 271 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 EPB42P16452 691 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 TSFMP43897 325 aaKnown RBP13.01□□□□□ -0.33
PRPF18-202ENST00000378572 C18orf21Q32NC0 220 aaPredicted RBP13.01□□□□□ -0.33
PRPF18-202ENST00000378572 FBXO48Q5FWF7 155 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 SUSD1Q6UWL2 747 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 RPS27LQ71UM5 84 aaKnown RBP13.01□□□□□ -0.33
PRPF18-202ENST00000378572 RNF44Q7L0R7 432 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 GOLGA7Q7Z5G4 137 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 KBTBD2Q8IY47 623 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 AFAP1L2Q8N4X5 818 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 CSNK1A1LQ8N752 337 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 OR2A1Q8NGT9 310 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 TRPC4APQ8TEL6 797 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 AGAP11Q8TF27 550 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 ZNF480Q8WV37 535 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 MESP1Q9BRJ9 268 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 PTGFRNQ9P2B2 879 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 VTI1BQ9UEU0 232 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 ZDHHC2Q9UIJ5 367 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 CDC14AQ9UNH5 594 aa13.01□□□□□ -0.33
PRPF18-202ENST00000378572 DYTNA2CJ06 578 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 VSTM2BA6NLU5 285 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 ZNF839A8K0R7 811 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 H0YGG7 62 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 UBFD1O14562 309 aaKnown RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 LRRTM2O43300 516 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 PRICKLE3O43900 615 aaPredicted RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 CCNT2O60583 730 aaKnown RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 CCNDBP1O95273 360 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 ESRRBO95718 433 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 OTCP00480 354 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 HEXBP07686 556 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 ARF3P61204 181 aaPredicted RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 PCDH1Q08174 1060 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 MFAP5Q13361 173 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 GLIPR1L2Q4G1C9 344 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 VWA2Q5GFL6 755 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 THEMIS2Q5TEJ8 643 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 B3GNTL1Q67FW5 361 aaPredicted RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 TEX9Q8N6V9 391 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 OR1N1Q8NGS0 311 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 HMGCLL1Q8TB92 370 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 SMPDL3AQ92484 453 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 MMABQ96EY8 250 aaPredicted RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 NTMT1Q9BV86 223 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 NPHS2Q9NP85 383 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 SEMA4BQ9NPR2 832 aaPredicted RBP13□□□□□ -0.33
PRPF18-202ENST00000378572 OLAHQ9NV23 265 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 DNAJC11Q9NVH1 559 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 PNPOQ9NVS9 261 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 TAC3Q9UHF0 121 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 ANGPTL3Q9Y5C1 460 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 MYO9AB2RTY4 2548 aa13□□□□□ -0.33
PRPF18-202ENST00000378572 HDAC3O15379 428 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 WDR47O94967 919 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 ONECUT2O95948 504 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 EDN3P14138 238 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 CCND1P24385 295 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 GDF5P43026 501 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 PNLIPRP1P54315 467 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 EMP2P54851 167 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 YBX1P67809 324 aaKnown RBP12.99□□□□□ -0.33
PRPF18-202ENST00000378572 CRB2Q5IJ48 1285 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 SH2D4BQ5SQS7 431 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 MFSD4BQ5TF39 518 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 CLYBLQ8N0X4 340 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 SIRT6Q8N6T7 355 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 BCORP1Q8N888 145 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 ANKS4BQ8N8V4 417 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 CCDC197Q8NCU1 140 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 CATSPER1Q8NEC5 780 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 C10orf82Q8WW14 230 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 SEC16BQ96JE7 1060 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 C10orf90Q96M02 699 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 PLCD4Q9BRC7 762 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 SGPP1Q9BX95 441 aa12.99□□□□□ -0.33
PRPF18-202ENST00000378572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms