RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TM9SF3Q9HD45 589 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 HMG20AQ9NP66 347 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 C5AR2Q9P296 337 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 GMEB2Q9UKD1 530 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 C17orf113A0A1B0GUU1 675 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 GPR89AB7ZAQ6 455 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 FZD6O60353 706 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF217O75362 1048 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 CCDC159P0C7I6 412 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 GPR89BP0CG08 455 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 ETFAP13804 333 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 TALDO1P37837 337 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 RBBP4Q09028 425 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 ATP6AP1Q15904 470 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 EIPR1Q53HC9 387 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 LCTLQ6UWM7 567 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 Q6ZSR9 355 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 PNO1Q9NRX1 252 aaKnown RBP13.9□□□□□ -0.18
TCOF1-202ENST00000377797 TMEM181Q9P2C4 612 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 PNMA8CA0A1B0GUJ8 204 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 VNN2O95498 520 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 FOSL2P15408 326 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 FMO3P31513 532 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 OLR1P78380 273 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 TMEM45AQ9NWC5 275 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 MARK1Q9P0L2 795 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 WDR45Q9Y484 360 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 IFNGP01579 166 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 GM2AP17900 193 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 IMPA1P29218 277 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 MRPS21P82921 87 aaKnown RBP13.9□□□□□ -0.18
TCOF1-202ENST00000377797 HHEXQ03014 270 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 ARHGAP19Q14CB8 494 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 FAAH2Q6GMR7 532 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 OR4C11Q6IEV9 310 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 C6orf120Q7Z4R8 191 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 FAM98AQ8NCA5 519 aaKnown RBP13.9□□□□□ -0.18
TCOF1-202ENST00000377797 NDC1Q9BTX1 674 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 DMRT3Q9NQL9 472 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 STOML2Q9UJZ1 356 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
TCOF1-202ENST00000377797 FAM25AB3EWG3 89 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 FAM25CB3EWG5 89 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 FAM25GB3EWG6 89 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 CTHP32929 405 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 TNFRSF4P43489 277 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 RPS15AP62244 130 aaKnown RBP13.89□□□□□ -0.19
TCOF1-202ENST00000377797 ZXDBP98169 803 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 DTWD1Q8N5C7 304 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 ZNF248Q8NDW4 579 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 KBTBD8Q8NFY9 601 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 TOE1Q96GM8 510 aaKnown RBP13.89□□□□□ -0.19
TCOF1-202ENST00000377797 HHIPQ96QV1 700 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 TOR3AQ9H497 397 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 PREBQ9HCU5 417 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 C1orf226A1L170 272 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 REM1O75628 298 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 OLFM2O95897 454 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 OR12D1P0DN82 309 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
TCOF1-202ENST00000377797 FIGLAQ6QHK4 219 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 RETREG3Q86VR2 466 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 GOLM1Q8NBJ4 401 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 PELI2Q9HAT8 420 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 RHCGQ9UBD6 479 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 SARDHQ9UL12 918 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 KCNC4Q03721 635 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 ATP1A4Q13733 1029 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 ALG11Q2TAA5 492 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 ASTLQ6HA08 431 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-202ENST00000377797 TRIM73Q86UV7 250 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 IQCHQ86VS3 1027 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 OR52E1Q8NGJ3 308 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 SOX17Q9H6I2 414 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-202ENST00000377797 PTGFRNQ9P2B2 879 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 LOC100130705A0A1B0GUX0 176 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 PRAMEF26H0Y7S4 382 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 MPZL2O60487 215 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 DRD2P14416 443 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 GGT1P19440 569 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 CPOXP36551 454 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 SRP54P61011 504 aaKnown RBP13.89□□□□□ -0.19
TCOF1-202ENST00000377797 MSANTD1Q6ZTZ1 278 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 POMGNT2Q8NAT1 580 aa13.89□□□□□ -0.19
TCOF1-202ENST00000377797 GTPBP2Q9BX10 602 aaKnown RBP13.89□□□□□ -0.19
TCOF1-202ENST00000377797 PSME4Q14997 1843 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 KPNA4O00629 521 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 SNAP29O95721 258 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MAGP20916 626 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 PSMD4P55036 377 aaKnown RBP13.88□□□□□ -0.19
TCOF1-202ENST00000377797 CTBSQ01459 385 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 LGALS3BPQ08380 585 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 MYBPC3Q14896 1274 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 ARMCX4Q5H9R4 360 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 KBTBD2Q8IY47 623 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 CSNK1A1LQ8N752 337 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 ALPK1Q96QP1 1244 aa13.88□□□□□ -0.19
TCOF1-202ENST00000377797 IL4I1Q96RQ9 567 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms