RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RPL3P39023 403 aaKnown RBP24.21■■□□□ 1.47
C9orf40-201ENST00000376854 NNMTP40261 264 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 XCR1P46094 333 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 MEF2AQ02078 507 aaPredicted RBP24.21■■□□□ 1.47
C9orf40-201ENST00000376854 ZNF630Q2M218 657 aaPredicted RBP24.21■■□□□ 1.47
C9orf40-201ENST00000376854 LY6G5CQ5SRR4 150 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 LIPIQ6XZB0 460 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 NLRP8Q86W28 1048 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 GTPBP3Q969Y2 492 aaKnown RBP24.21■■□□□ 1.47
C9orf40-201ENST00000376854 WDR34Q96EX3 536 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 FAM129BQ96TA1 746 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 OR51E2Q9H255 320 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 MYNNQ9NPC7 610 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 ACER3Q9NUN7 267 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 MS4A12Q9NXJ0 267 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 TAS2R9Q9NYW1 312 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 ITM2BQ9Y287 266 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 IFNA14P01570 189 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 CLTBP09497 229 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 MMP12P39900 470 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 CYP4F2P78329 520 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 GRIN2CQ14957 1233 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 ARMCX4Q5H9R4 360 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 HIST2H2AA3Q6FI13 130 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 FAM71E1Q6IPT2 247 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 CFAP206Q8IYR0 622 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 KBTBD8Q8NFY9 601 aa24.21■■□□□ 1.47
C9orf40-201ENST00000376854 FAM32AQ9Y421 112 aaKnown RBP24.21■■□□□ 1.47
C9orf40-201ENST00000376854 ISPDA4D126 451 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 DSCR3O14972 297 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 SOAT1P35610 550 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 SLC13A2Q13183 592 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 GANABQ14697 944 aaKnown RBP24.2■■□□□ 1.46
C9orf40-201ENST00000376854 SOWAHCQ53LP3 525 aaPredicted RBP24.2■■□□□ 1.46
C9orf40-201ENST00000376854 FBXO15Q8NCQ5 510 aaPredicted RBP24.2■■□□□ 1.46
C9orf40-201ENST00000376854 RNF167Q9H6Y7 350 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 SACM1LQ9NTJ5 587 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 SLC6A14Q9UN76 642 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 HCN4Q9Y3Q4 1203 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 A3GALT2U3KPV4 340 aa24.2■■□□□ 1.46
C9orf40-201ENST00000376854 SAGE2PA6NJ88 616 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 KLHL18O94889 574 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 KLK1P06870 262 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 SERPINB1P30740 379 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 RGS6P49758 472 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 FOXD4Q12950 439 aaPredicted RBP24.19■■□□□ 1.46
C9orf40-201ENST00000376854 EIF4HQ15056 248 aaKnown RBP24.19■■□□□ 1.46
C9orf40-201ENST00000376854 TEAD2Q15562 447 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 PRSS53Q2L4Q9 553 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 ZNF557Q8N988 423 aaPredicted RBP24.19■■□□□ 1.46
C9orf40-201ENST00000376854 B3GNT7Q8NFL0 401 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 SGPP1Q9BX95 441 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 SPNS1Q9H2V7 528 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 RAB23Q9ULC3 237 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 A0A1W2PRB8 838 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 TBX1O43435 398 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 CCNB2O95067 398 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 GADD45GO95257 159 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 LINC00271P0C7V0 271 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 HSMCR30P0CW71 290 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 FUT4P22083 530 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 LIMS1P48059 325 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 ZNF181Q2M3W8 571 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 ZNF658BQ4V348 819 aaPredicted RBP24.19■■□□□ 1.46
C9orf40-201ENST00000376854 GPR65Q8IYL9 337 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 WRAP53Q9BUR4 548 aaKnown RBP24.19■■□□□ 1.46
C9orf40-201ENST00000376854 CDADC1Q9BWV3 514 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 NXF2Q9GZY0 626 aaKnown RBP24.19■■□□□ 1.46
C9orf40-201ENST00000376854 SP140LQ9H930 580 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 ANGPT4Q9Y264 503 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 PCDHGA3Q9Y5H0 932 aa24.19■■□□□ 1.46
C9orf40-201ENST00000376854 SYN1P17600 705 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 WEE1P30291 646 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CRISP3P54108 245 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CDC20Q12834 499 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 IRF3Q14653 427 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 PTGES3Q15185 160 aaKnown RBP24.18■■□□□ 1.46
C9orf40-201ENST00000376854 TPRG1LQ5T0D9 272 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 ERAP2Q6P179 960 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 ZNF366Q8N895 744 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CRELD1Q96HD1 420 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 TDP1Q9NUW8 608 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 DKK3Q9UBP4 350 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 ENPP4Q9Y6X5 453 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 TRBC2A0A5B9 178 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 TRIM43BA6NCK2 446 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 KRT75O95678 551 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 ARAFP10398 606 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 HMGA2P52926 109 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 PCBP3P57721 371 aaKnown RBP24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CDC42P60953 191 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 OLR1P78380 273 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 METTL4Q8N3J2 472 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 OR9A1PQ8NGU1 263 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 SLC5A11Q8WWX8 675 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CHCHD6Q9BRQ6 235 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CENPOQ9BU64 300 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CPNE5Q9HCH3 593 aa24.18■■□□□ 1.46
C9orf40-201ENST00000376854 CCDC59Q9P031 241 aaKnown RBP24.18■■□□□ 1.46
C9orf40-201ENST00000376854 ANKMY1Q9P2S6 941 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms