RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RHOXF1Q8NHV9 184 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ARSGQ96EG1 525 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC30A2Q9BRI3 323 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMED9Q9BVK6 235 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 STOX2Q9P2F5 926 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZNF624Q9P2J8 865 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TBC1D14Q9P2M4 693 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CLCA2Q9UQC9 943 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FAM240BA0A1B0GVZ2 78 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CLCA1A8K7I4 914 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 H3BNC9 293 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CPNE3O75131 537 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GABARAPO95166 117 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NR2F6P10588 404 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 C17orf64Q86WR6 236 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CYP4Z2PQ8N1L4 340 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 REPS1Q96D71 796 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MMP27Q9H306 513 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 BEX1Q9HBH7 125 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 AHSPQ9NZD4 102 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC6A14Q9UN76 642 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HCN4Q9Y3Q4 1203 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MYOFQ9NZM1 2061 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 M0R3H8 397 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SSX4O60224 188 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PCCBP05166 539 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 AP1S2P56377 157 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MAP4K2Q12851 820 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 EIF4EBP2Q13542 120 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 LASP1Q14847 261 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZSWIM7Q19AV6 140 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 BCL7AQ4VC05 210 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PLET1Q6UQ28 207 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OR5D16Q8NGK9 328 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 STARD8Q92502 1023 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RNFT2Q96EX2 444 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PTGFRNQ9P2B2 879 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CLEC2DQ9UHP7 191 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 POFUT2Q9Y2G5 429 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IFT52Q9Y366 437 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PCDHGB6Q9Y5F9 930 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 WASHC1A8K0Z3 465 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SCAMP2O15127 329 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NDUFB5O43674 189 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CD160O95971 181 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PPIBP23284 216 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MAT2AP31153 395 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RYKP34925 604 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RAB8AP61006 207 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZNF763Q0D2J5 394 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OXA1LQ15070 435 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TBRG1Q3YBR2 411 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 WASH2PQ6VEQ5 465 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MACC1Q6ZN28 852 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 METTL4Q8N3J2 472 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ASB11Q8WXH4 323 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PAQR5Q9NXK6 330 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 WDR37Q9Y2I8 494 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MIA3Q5JRA6 1907 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SAGE2PA6NJ88 616 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 H3BSH0 61 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CCRL2O00421 344 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ENTPD6O75354 484 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 UPK1BO75841 260 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 WISP3O95389 354 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TIA1P31483 386 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TAS2R41P59536 307 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TEAD2Q15562 447 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZNF517Q6ZMY9 492 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NRARPQ7Z6K4 114 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RBM45Q8IUH3 476 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MROQ9BYG7 248 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GULP1Q9UBP9 304 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HTTP42858 3142 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 WASH3PC4AMC7 463 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FCER2P06734 321 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SPNP16150 400 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CSTF2P33240 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KRR1Q13601 381 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ATAT1Q5SQI0 421 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 LAIR1Q6GTX8 287 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PAQR6Q6TCH4 344 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMIGD1Q6UXZ0 262 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TRIM46Q7Z4K8 759 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 VN1R5Q7Z5H4 357 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ALDH16A1Q8IZ83 802 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KREMEN2Q8NCW0 462 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TCEAL4Q96EI5 215 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 REEP4Q9H6H4 257 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MAGIXQ9H6Y5 334 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMEM184CQ9NVA4 438 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CORO2BQ9UQ03 480 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PCM1Q15154 2024 aa13.78□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OR6C70A6NIJ9 312 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GNB5O14775 395 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KLK8O60259 260 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IGLV3-27P01718 113 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OR12D1P0DN82 309 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms