RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 DPP9Q86TI2 863 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 NLE1Q9NVX2 485 aaPredicted RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 TMEM14AQ9Y6G1 99 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 H7C4K7 107 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ARHGAP33O14559 1287 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 JTBO76095 146 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 TYMPP19971 482 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 CDKN2BP42772 138 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ST3GAL3Q11203 375 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 SNAPC2Q13487 334 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ADPRHL1Q8NDY3 354 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ZDHHC11Q9H8X9 412 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 OR6C2Q9NZP2 312 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 SALL1Q9NSC2 1324 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 CAPN5O15484 640 aaPredicted RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 TSPAN12O95859 305 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 FAM174BQ3ZCQ3 159 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 UBAP2Q5T6F2 1119 aaKnown RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 MBLAC2Q68D91 279 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 SLC30A6Q6NXT4 461 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 ZNF627Q7L945 461 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 DPY19L4Q7Z388 723 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 AQP11Q8NBQ7 271 aa6.4□□□□□ -1.39
UBR4-204ENST00000375254 RPL3LQ92901 407 aaKnown RBP6.4□□□□□ -1.39
UBR4-204ENST00000375254 CRISP3P54108 245 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 RIN1Q13671 783 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 XKR6Q5GH73 641 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 STEAP3Q658P3 488 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SPNS1Q9H2V7 528 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NOX3Q9HBY0 568 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF586Q9NXT0 402 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 IKZF2Q9UKS7 526 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 KIAA1024LP59773 190 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CLLU1Q5K131 121 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 WASH2PQ6VEQ5 465 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SLC35D2Q76EJ3 337 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 LDB1Q86U70 411 aaPredicted RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 C12orf40Q86WS4 652 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 OR56A1Q8NGH5 318 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ACDQ96AP0 544 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CD180Q99467 661 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 RLIMQ9NVW2 624 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 LILRB5O75023 590 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SNRNP70P08621 437 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 GIPP09681 153 aaPredicted RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 C5AR1P21730 350 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 THBS3P49746 956 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NUMBP49757 651 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TAS2R39P59534 338 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 DOK6Q6PKX4 331 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PIP5K1AQ99755 562 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TARS2Q9BW92 718 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZFP14Q9HCL3 533 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF670-ZNF695F2Z2N8 137 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TPOP07202 933 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PKMP14618 531 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 OTOP1Q7RTM1 612 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 IRF2BP1Q8IU81 584 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 EXTL1Q92935 676 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 MUL1Q969V5 352 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TECTBQ96PL2 329 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 NOX1Q9Y5S8 564 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 MYOM2P54296 1465 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 METTL15A6NJ78 407 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ADH1CP00326 375 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 OAS1P00973 400 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 S100A11P31949 105 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SLC9B1Q4ZJI4 515 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 RTL6Q6ICC9 239 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TANGO2Q6ICL3 276 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CD300LGQ6UXG3 332 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ADGRF3Q8IZF5 1079 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TMEM68Q96MH6 324 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 MEAF6Q9HAF1 191 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ITM2CQ9NQX7 267 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 OLAHQ9NV23 265 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 FGF1P05230 155 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZP3P21754 424 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 LAP3P28838 519 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 OSCARQ8IYS5 282 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF676Q8N7Q3 588 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 AGPAT4Q9NRZ5 378 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SLCO1B1Q9Y6L6 691 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PRDX5P30044 214 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 STXBP1P61764 594 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 C10orf120Q5SQS8 335 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 FAM183BPQ6ZVS7 135 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 EEPD1Q7L9B9 569 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 S100A7AQ86SG5 101 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 FTHL17Q9BXU8 183 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PKIBQ9C010 78 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 APMAPQ9HDC9 416 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 EXOGQ9Y2C4 368 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 ABCC2Q92887 1545 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PNPLA6Q8IY17 1366 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 FAAHO00519 579 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SCAMP3O14828 347 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 C22orf31O95567 290 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms