RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OR5P2Q8WZ92 322 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 RDH12Q96NR8 316 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TEFMQ96QE5 360 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TMEM38AQ9H6F2 299 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 EPS8L2Q9H6S3 715 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PNPLA3Q9NST1 481 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TAS2R7Q9NYW3 318 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 DUSP12Q9UNI6 340 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PCDHGA2Q9Y5H1 932 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ISM1B1AKI9 464 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PDPK1O15530 556 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NUDT7P0C024 238 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 UQCRC2P22695 453 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SSR2P43308 183 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TSFMP43897 325 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 C16orf72Q14CZ0 275 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZDHHC13Q8IUH4 622 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FAM20CQ8IXL6 584 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NAGSQ8N159 534 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR4E2Q8NGC2 313 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FLVCR1-AS1Q8TAF5 88 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MAGEE2Q8TD90 523 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SDCCAG3Q96C92 435 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MS4A6EQ96DS6 147 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ASPSCR1Q9BZE9 553 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SRMSQ9H3Y6 488 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NEUROD4Q9HD90 331 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 IL1RAPQ9NPH3 570 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 USE1Q9NZ43 259 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 EHD3Q9NZN3 535 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PADI4Q9UM07 663 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FAF1Q9UNN5 650 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 BTN3A3O00478 584 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZNF682O95780 498 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NTRK1P04629 796 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ALPLP05186 524 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 LINGO3P0C6S8 592 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 DRD2P14416 443 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CD6P30203 668 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PCBP4P57723 403 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ELOAQ14241 798 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 COX20Q5RI15 118 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GCNT6Q5T4J0 391 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TRIM40Q6P9F5 258 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZNF793Q6ZN11 406 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZDHHC21Q8IVQ6 265 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR5K1Q8NHB7 308 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FAM174AQ8TBP5 190 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 C17orf62Q9BQA9 187 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 C1GALT1Q9NS00 363 aa17.13■□□□□ 0.33
HLA-DQB1-201ENST00000374943 G3V2T6 193 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 H0YAE9 185 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PLOD2O00469 737 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SERPIND1P05546 499 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CHI3L1P36222 383 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CAPGP40121 348 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CRATP43155 626 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MLC1Q15049 377 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CYBRD1Q53TN4 286 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PRRT3Q5FWE3 981 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KRT80Q6KB66 452 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ABHD17CQ6PCB6 329 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 IYDQ6PHW0 289 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CCDC80Q76M96 950 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PIWIL3Q7Z3Z3 882 aaKnown RBP17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 DHRSXQ8N5I4 330 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SRFBP1Q8NEF9 429 aaKnown RBP17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TSTD1Q8NFU3 115 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR2L5Q8NG80 312 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PSMA8Q8TAA3 256 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 JPH3Q8WXH2 748 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KCNC2Q96PR1 638 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GSDMCQ9BYG8 508 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FAM192AQ9GZU8 254 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CHRDQ9H2X0 955 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CXorf36Q9H7Y0 433 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SLAMF7Q9NQ25 335 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ACSS1Q9NUB1 689 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 POT1Q9NUX5 634 aa17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TEX10Q9NXF1 929 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TDRD6O60522 2096 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SPTY2D1-AS1A0A0U1RR47 76 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FAM221BA6H8Z2 402 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GNGT2O14610 69 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TNFSF14O43557 240 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZNF217O75362 1048 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ETFAP13804 333 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 HOXB3P14651 431 aaPredicted RBP17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ALDH9A1P49189 494 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CRYBA2P53672 197 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PLA2G16P53816 162 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 RPS15AP62244 130 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ADARB1P78563 741 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PPP2R2BQ00005 443 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 EEF1A2Q05639 463 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 EIF2B5Q13144 721 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 APOFQ13790 326 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SLC5A12Q1EHB4 618 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MRM1Q6IN84 353 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms