RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 APC2O95996 2303 aa14.2□□□□□ -0.14
HSPG2-201ENST00000374673 TMEM233B4DJY2 109 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 NPIPB8E9PQR5 432 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 CHST10O43529 356 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 DNAJB6O75190 326 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 RECKO95980 971 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ZGLP1P0C6A0 271 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ATXN8OSP0DMR3 200 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 XCR1P46094 333 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 RPS18P62269 152 aaKnown RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 OLR1P78380 273 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 TBL3Q12788 808 aaKnown RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 RUNX2Q13950 521 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 CRTC2Q53ET0 693 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 VWA2Q5GFL6 755 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 MED25Q71SY5 747 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ZC3H7AQ8IWR0 971 aaKnown RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ARFGAP2Q8N6H7 521 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ZNF781Q8N8C0 355 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ACOT4Q8N9L9 421 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 OR2Y1Q8NGV0 311 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 AGR3Q8TD06 166 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ADAMTS18Q8TE60 1221 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 TWIST2Q8WVJ9 160 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 STARD8Q92502 1023 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ZNF75CPQ92670 426 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 MIEF2Q96C03 454 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 OR1F2PQ96R84 312 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 YIPF2Q9BWQ6 316 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 SORBS1Q9BX66 1292 aaKnown RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 MRPL1Q9BYD6 325 aaKnown RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ILKAPQ9H0C8 392 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 TUBB1Q9H4B7 451 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ACTL8Q9H568 366 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 DDX31Q9H8H2 851 aaKnown RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ADAM29Q9UKF5 820 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 DAPP1Q9UN19 280 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 MRPS18BQ9Y676 258 aaKnown RBP14.19□□□□□ -0.14
HSPG2-201ENST00000374673 ACACAQ13085 2346 aa14.19□□□□□ -0.14
HSPG2-201ENST00000374673 URB1O60287 2271 aaKnown RBP14.18□□□□□ -0.14
HSPG2-201ENST00000374673 ASPMQ8IZT6 3477 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 A0A0A6YYD5 115 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 SLC28A1O00337 649 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 EFSO43281 561 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 CREG1O75629 220 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 RSL1D1O76021 490 aaKnown RBP14.18□□□□□ -0.14
HSPG2-201ENST00000374673 BMP10O95393 424 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 RNH1P13489 461 aaKnown RBP14.18□□□□□ -0.14
HSPG2-201ENST00000374673 WT1P19544 449 aaPredicted RBP14.18□□□□□ -0.14
HSPG2-201ENST00000374673 PRPH2P23942 346 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 ITPKBP27987 946 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 FOLR3P41439 243 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 RPL14P50914 215 aaKnown RBP14.18□□□□□ -0.14
HSPG2-201ENST00000374673 UCNP55089 124 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 LIM2P55344 173 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 RAB38P57729 211 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 HMGCS1Q01581 520 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 OCRLQ01968 901 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 IMPG1Q17R60 797 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 SCIMPQ6UWF3 145 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 PAGE2Q7Z2X7 111 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 SHISA5Q8N114 240 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 CHTF18Q8WVB6 975 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 DYDC1Q8WWB3 177 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 PEX11GQ96HA9 241 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 LYRM4Q9HD34 91 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 SIRT5Q9NXA8 310 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 PTRH2Q9Y3E5 179 aaKnown RBP14.18□□□□□ -0.14
HSPG2-201ENST00000374673 CCL27Q9Y4X3 112 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 CEP295Q9C0D2 2601 aa14.18□□□□□ -0.14
HSPG2-201ENST00000374673 ZNF891A8MT65 544 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 EEDO75530 441 aaKnown RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 UMODP07911 640 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 FHP07954 510 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 CYC1P08574 325 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 TPP2P29144 1249 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 MC1RQ01726 317 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 KLC1Q07866 573 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 SSPNQ14714 243 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 TUBB8Q3ZCM7 444 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 SPIN4Q56A73 249 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 MRM1Q6IN84 353 aaKnown RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 CCDC81Q6ZN84 652 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 Q6ZSR9 355 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 COMMD6Q7Z4G1 85 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 LRRC8CQ8TDW0 803 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 CKAP2Q8WWK9 683 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 TBC1D20Q96BZ9 403 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 C11orf24Q96F05 449 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 APIPQ96GX9 242 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 METTL2AQ96IZ6 378 aaKnown RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 CCT7Q99832 543 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 SOX17Q9H6I2 414 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 LYARQ9NX58 379 aaKnown RBP14.17□□□□□ -0.14
HSPG2-201ENST00000374673 KCMF1Q9P0J7 381 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 PTGDR2Q9Y5Y4 395 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 SCN2AQ99250 2005 aa14.17□□□□□ -0.14
HSPG2-201ENST00000374673 SRRM3A6NNA2 597 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-201ENST00000374673 PSMD12O00232 456 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-201ENST00000374673 PIP5K1BO14986 540 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms