RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 TPST1O60507 370 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 GMNNO75496 209 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 POP7O75817 140 aaKnown RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 SEC14L2O76054 403 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 RASAL1O95294 804 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 PDYNP01213 254 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 FTH1P02794 183 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 CDH1P12830 882 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 NELFEP18615 380 aaKnown RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 PRPH2P23942 346 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ACTR1BP42025 376 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 PRLHRP49683 370 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 HLCSP50747 726 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 BLKP51451 505 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ACTR1AP61163 376 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 BOP1Q14137 746 aaKnown RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 CPSF6Q16630 551 aaKnown RBP eCLIP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 FAM174BQ3ZCQ3 159 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 MFSD4BQ5TF39 518 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 STPG1Q5TH74 334 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 TMEM214Q6NUQ4 689 aaKnown RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 GALNT18Q6P9A2 607 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 FAM83HQ6ZRV2 1179 aaPredicted RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 KANSL1Q7Z3B3 1105 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 EPHX4Q8IUS5 362 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 EID2Q8N6I1 236 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 L3MBTL4Q8NA19 623 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 CCDC115Q96NT0 180 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ZCCHC2Q9C0B9 1178 aaKnown RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 POLR1BQ9H9Y6 1135 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 SPASTQ9UBP0 616 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 DAPK2Q9UIK4 370 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 PSME2Q9UL46 239 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 KCNE1BA0A087WTH5 132 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 RNF103-CHMP3A0A140T963 221 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 CLDN25C9JDP6 229 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 NPIPB8E9PQR5 432 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 SH3BP5O60239 455 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 JRKO75564 520 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 LDLRP01130 860 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 PGRP06401 933 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 GIMD1P0DJR0 217 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 PRPS2P11908 318 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 BCKDHAP12694 445 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 GGT1P19440 569 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 MAPK1P28482 360 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 MTPNP58546 118 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 MERTKQ12866 999 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ITGADQ13349 1161 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 SELPLGQ14242 412 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ABRAXAS1Q6UWZ7 409 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 FAM46DQ8NEK8 389 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 SETD7Q8WTS6 366 aaKnown RBP13.67□□□□□ -0.22
HMGA1-203ENST00000374116 SELENOMQ8WWX9 145 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ELMO1Q92556 727 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ACPTQ9BZG2 426 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 DPEP2Q9H4A9 486 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 ELOVL6Q9H5J4 265 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 RMND5AQ9H871 391 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 PRDM8Q9NQV8 689 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 DNAJC11Q9NVH1 559 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 VAPAQ9P0L0 249 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 NEUROG3Q9Y4Z2 214 aa13.67□□□□□ -0.22
HMGA1-203ENST00000374116 SLC5A10A0PJK1 596 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 B4DGG1 531 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 KMOO15229 486 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 ACOX3O15254 700 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 PSIP1O75475 530 aaKnown RBP13.66□□□□□ -0.22
HMGA1-203ENST00000374116 ANXA6P08133 673 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 CD59P13987 128 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 ACPPP15309 386 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 MAP4P27816 1152 aaKnown RBP13.66□□□□□ -0.22
HMGA1-203ENST00000374116 PREPP48147 710 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 CLDN8P56748 225 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 CD300CQ08708 224 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 ILF3Q12906 894 aaKnown RBP eCLIP13.66□□□□□ -0.222e-9■□□□□ 8.4
HMGA1-203ENST00000374116 SPCS2Q15005 226 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 PTCHD3Q3KNS1 767 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 SPANXN4Q5MJ08 99 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 CFAP206Q8IYR0 622 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 DTWD1Q8N5C7 304 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 NUDT8Q8WV74 236 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 MTFMTQ96DP5 389 aaKnown RBP13.66□□□□□ -0.22
HMGA1-203ENST00000374116 CMTM7Q96FZ5 175 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 BDH2Q9BUT1 245 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 CHID1Q9BWS9 393 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 PIF1Q9H611 641 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 GORASP2Q9H8Y8 452 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 TAAR2Q9P1P5 351 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 TBC1D29Q9UFV1 150 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 OAZ3Q9UMX2 235 aa13.66□□□□□ -0.22
HMGA1-203ENST00000374116 DFNA5O60443 496 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 GSTM1P09488 218 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 ZNF182P17025 639 aaPredicted RBP13.65□□□□□ -0.22
HMGA1-203ENST00000374116 ZNF33BQ06732 778 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 CYP4F3Q08477 520 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms