RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 PUM1Q14671 1186 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHUK-201ENST00000370397 VEPH1Q14D04 833 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 LIPJQ5W064 366 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 RFLNAQ6ZTI6 216 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 PHC2Q8IXK0 858 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 GTPBP3Q969Y2 492 aaKnown RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 OR4K3Q96R72 315 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 STUB1Q9UNE7 303 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 CORO2BQ9UQ03 480 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 RUVBL1Q9Y265 456 aaKnown RBP16.79■□□□□ 0.28
CHUK-201ENST00000370397 CMAHPQ9Y471 501 aa16.79■□□□□ 0.28
CHUK-201ENST00000370397 C2orf78A6NCI8 922 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 PLD2O14939 933 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 CKMT1AP12532 417 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 SSTR4P31391 388 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 CSTF2P33240 577 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHUK-201ENST00000370397 SPAM1P38567 509 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 PRIM2P49643 509 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 CRISP1P54107 249 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 AP1S1P61966 158 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 RTP2Q5QGT7 225 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 PAQR6Q6TCH4 344 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 MTERF1Q99551 399 aaKnown RBP16.78■□□□□ 0.28
CHUK-201ENST00000370397 SNX11Q9Y5W9 270 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 E7EQ34 232 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 C8GP07360 202 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 LIM2P55344 173 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 ATP13A5Q4VNC0 1218 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 MPPE1Q53F39 396 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 C12orf73Q69YU5 71 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 METTL2AQ96IZ6 378 aaKnown RBP16.78■□□□□ 0.28
CHUK-201ENST00000370397 FUZQ9BT04 418 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 BEX2Q9BXY8 128 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 NMNAT1Q9HAN9 279 aaPredicted RBP16.78■□□□□ 0.28
CHUK-201ENST00000370397 ABCB9Q9NP78 766 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 DNAJC11Q9NVH1 559 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 CRLS1Q9UJA2 301 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 H0YIV9 168 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 TPD52L2O43399 206 aaKnown RBP16.78■□□□□ 0.28
CHUK-201ENST00000370397 IGFBP1P08833 259 aaPredicted RBP16.78■□□□□ 0.28
CHUK-201ENST00000370397 PPIBP23284 216 aaKnown RBP16.78■□□□□ 0.28
CHUK-201ENST00000370397 ARMC4Q5T2S8 1044 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 CEACAM20Q6UY09 585 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 ANKS3Q6ZW76 656 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 GON7Q9BXV9 100 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 SLC22A4Q9H015 551 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 OGDHLQ9ULD0 1010 aa16.78■□□□□ 0.28
CHUK-201ENST00000370397 TFECO14948 347 aaPredicted RBP16.77■□□□□ 0.28
CHUK-201ENST00000370397 HMGA1P17096 107 aaKnown RBP16.77■□□□□ 0.28
CHUK-201ENST00000370397 FKBP1BP68106 108 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 TAB1Q15750 504 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 LEXMQ3ZCV2 418 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 CEP78Q5JTW2 689 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 KLHDC8AQ8IYD2 350 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 AQP11Q8NBQ7 271 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 CEP19Q96LK0 163 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 TMEM121BQ9BXQ6 578 aaPredicted RBP16.77■□□□□ 0.28
CHUK-201ENST00000370397 SNTG1Q9NSN8 517 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 IMPAD1Q9NX62 359 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 ZDHHC3Q9NYG2 299 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 SEC14L4Q9UDX3 406 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 EOMESO95936 686 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 AKR1A1P14550 325 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 ZNF8P17098 575 aaPredicted RBP16.77■□□□□ 0.28
CHUK-201ENST00000370397 FAPQ12884 760 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 ZNF628Q5EBL2 1059 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.77■□□□□ 0.28
CHUK-201ENST00000370397 XKRXQ6PP77 449 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 ABI3BPQ7Z7G0 1075 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 IL17RCQ8NAC3 791 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 GRPEL2Q8TAA5 225 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 ZC3HAV1LQ96H79 300 aaKnown RBP16.77■□□□□ 0.28
CHUK-201ENST00000370397 KLF16Q9BXK1 252 aaPredicted RBP16.77■□□□□ 0.28
CHUK-201ENST00000370397 TM6SF2Q9BZW4 377 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 RNF121Q9H920 327 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 SNX7Q9UNH6 387 aa16.77■□□□□ 0.28
CHUK-201ENST00000370397 MPZL2O60487 215 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 FHP07954 510 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 ALAS2P22557 587 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 CDC42P60953 191 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 SPHARQ15513 63 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 CPTPQ5TA50 214 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 CRTC1Q6UUV9 634 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 C1orf52Q8N6N3 182 aaKnown RBP16.77■□□□□ 0.27
CHUK-201ENST00000370397 NFKBIDQ8NI38 313 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 TCF25Q9BQ70 676 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 HCSTQ9UBK5 93 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 KLHL20Q9Y2M5 609 aa16.77■□□□□ 0.27
CHUK-201ENST00000370397 SF3B6Q9Y3B4 125 aaKnown RBP16.77■□□□□ 0.27
CHUK-201ENST00000370397 KIAA1549LQ6ZVL6 1849 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 HEPACAM2A8MVW5 462 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 CLEC2LP0C7M8 214 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 MPC1LP0DKB6 136 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 MYL9P24844 172 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 ARPP19P56211 112 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 PTSQ03393 145 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 SEC23BQ15437 767 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 TIGD3Q6B0B8 471 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms