RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CISD2Q8N5K1 135 aaKnown RBP19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 L3MBTL4Q8NA19 623 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 TMEM52Q8NDY8 209 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 CATSPER1Q8NEC5 780 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 NFAM1Q8NET5 270 aaPredicted RBP19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 DNAJB14Q8TBM8 379 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 CCT6BQ92526 530 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 PTCHD1Q96NR3 888 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 SERINC2Q96SA4 455 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 ILKAPQ9H0C8 392 aaPredicted RBP19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 MMACHCQ9Y4U1 282 aa19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 TNPO3Q9Y5L0 923 aaKnown RBP19.27■□□□□ 0.68
SMNDC1-201ENST00000369592 USP9YO00507 2555 aaPredicted RBP19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 EXOC1LA0A1B0GW35 172 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 H0YIV9 168 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 STX16-NPEPL1H3BU86 382 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 TGFBR3LH3BV60 316 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 STX16O14662 325 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 MAOAP21397 527 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 PIK3CBP42338 1070 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 TNFSF10P50591 281 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 HNRNPFP52597 415 aaKnown RBP19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 PLA2G16P53816 162 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 MTTPP55157 894 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 OR4D2P58180 307 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 SLC29A2Q14542 456 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 ZNF169Q14929 603 aaPredicted RBP19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 TLR1Q15399 786 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 BTBD16Q32M84 506 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 TMEM35AQ53FP2 167 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 TRIM40Q6P9F5 258 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 GOLGA7Q7Z5G4 137 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 ATCAYQ86WG3 371 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 ELP5Q8TE02 316 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 MZB1Q8WU39 189 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 FAR2Q96K12 515 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 LPAR4Q99677 370 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 ASF1BQ9NVP2 202 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 CPSF2Q9P2I0 782 aaKnown RBP19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 XPR1Q9UBH6 696 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 ADGRE2Q9UHX3 823 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 TMCO1Q9UM00 188 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 DAPP1Q9UN19 280 aa19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 PPIEQ9UNP9 301 aaKnown RBP19.26■□□□□ 0.67
SMNDC1-201ENST00000369592 ZGRF1Q86YA3 2104 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 TCP11X1B4DZS4 312 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 OR7A17O14581 309 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 B3GALT2O43825 422 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 CERS1P27544 350 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 TNFRSF8P28908 595 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 UQCRFS1P47985 274 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 LIM2P55344 173 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 GTF2H2Q13888 395 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 DEPDC1Q5TB30 811 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 GTF2H2CQ6P1K8 395 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 ARMC10Q8N2F6 343 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 EFCAB3Q8N7B9 438 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 PTGR2Q8N8N7 351 aaPredicted RBP19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 ADAMTS18Q8TE60 1221 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 MTBPQ96DY7 904 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 KCNC2Q96PR1 638 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 MRPL57Q9BQC6 102 aaKnown RBP19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 TBCDQ9BTW9 1192 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 C1QTNF3Q9BXJ4 246 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 ZBTB26Q9HCK0 441 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 PSD3Q9NYI0 1048 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 PLA2G3Q9NZ20 509 aa19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 SPTAN1Q13813 2472 aaKnown RBP19.25■□□□□ 0.67
SMNDC1-201ENST00000369592 A0A088AWK7 358 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 WDPCPO95876 746 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 ZNF10P21506 573 aaPredicted RBP19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 ATP5A1P25705 553 aaKnown RBP19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 HSD17B7P56937 341 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 KHDRBS2Q5VWX1 349 aaKnown RBP19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 GSPT2Q8IYD1 628 aaKnown RBP19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 RNF175Q8N4F7 328 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 SRFBP1Q8NEF9 429 aaKnown RBP19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 HUS1BQ8NHY5 278 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 WDR20Q8TBZ3 569 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 CMTM7Q96FZ5 175 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 CSF3RQ99062 836 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 NTMT1Q9BV86 223 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 ZNF717Q9BY31 904 aaPredicted RBP19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 MRPL46Q9H2W6 279 aaKnown RBP19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 IPPKQ9H8X2 491 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 LYRM4Q9HD34 91 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 DMRT3Q9NQL9 472 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 PCTPQ9UKL6 214 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 PPT2Q9UMR5 302 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 NOTCH2Q04721 2471 aa19.24■□□□□ 0.67
SMNDC1-201ENST00000369592 SAGE2PA6NJ88 616 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 PSMD12O00232 456 aaPredicted RBP19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 CBX6O95503 412 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 TGFB1P01137 390 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 RPS17P08708 135 aaKnown RBP19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 GNLYP22749 145 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 EEF1DP29692 281 aaKnown RBP19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 PIK3CGP48736 1102 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 GPR143P51810 404 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 ARFIP1P53367 373 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms