RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TAC3Q9UHF0 121 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 UTS2RQ9UKP6 389 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 FBXL21Q9UKT6 434 aa10.21□□□□□ -0.77
TPM3-212ENST00000368533 SNRNP200O75643 2136 aaKnown RBP10.21□□□□□ -0.77
TPM3-212ENST00000368533 A0A0G2JN53 185 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 FEZF1A0PJY2 475 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 ELOVL7A1L3X0 281 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 IFRD1O00458 451 aaPredicted RBP10.21□□□□□ -0.78
TPM3-212ENST00000368533 ASNA1O43681 348 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 KCNK2O95069 426 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 RASGRP1O95267 797 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 SERPIND1P05546 499 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 PGRP06401 933 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 CEACAM5P06731 702 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 SLC35G4P0C7Q5 338 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 HTR1BP28222 390 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 CLCA4Q14CN2 919 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 ANKRD34AQ69YU3 496 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 ZNF761Q86XN6 746 aaPredicted RBP10.21□□□□□ -0.78
TPM3-212ENST00000368533 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.21□□□□□ -0.78
TPM3-212ENST00000368533 ZNF555Q8NEP9 628 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 PATE1Q8WXA2 126 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 ZNF583Q96ND8 569 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 C19orf43Q9BQ61 176 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 BTBD1Q9H0C5 482 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 TOR3AQ9H497 397 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 IKZF5Q9H5V7 419 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 ADPRHL2Q9NX46 363 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 COQ3Q9NZJ6 369 aa10.21□□□□□ -0.78
TPM3-212ENST00000368533 NFKBIL1Q9UBC1 381 aaPredicted RBP10.21□□□□□ -0.78
TPM3-212ENST00000368533 MAGEB17A8MXT2 336 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 NADKO95544 446 aaPredicted RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 ZNF682O95780 498 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TGFB1P01137 390 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 NPPAP01160 153 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 C1QCP02747 245 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 EBLN1P0CF75 366 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 C8orf59Q8N0T1 100 aaPredicted RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 DPP10Q8N608 796 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 DEFB123Q8N688 67 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 COQ7Q99807 217 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 SORBS1Q9BX66 1292 aaKnown RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 IRF2BPLQ9H1B7 796 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 OR52A5Q9H2C5 316 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TCEAL2Q9H3H9 227 aaPredicted RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 AKIP1Q9NQ31 210 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 GIMAP4Q9NUV9 329 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 WDFY3Q8IZQ1 3526 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TRIM64BA6NI03 449 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 SLC28A1O00337 649 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 QSOX1O00391 747 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 CXCR6O00574 342 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 INMTO95050 263 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 KRT6AP02538 564 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 KRT6BP04259 564 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 GGT1P19440 569 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 S100A3P33764 101 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TTKP33981 857 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 SHMT2P34897 504 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 KRT6CP48668 564 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 ALDH3A2P51648 485 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TMBIM6P55061 237 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 MAD2L1Q13257 205 aaPredicted RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 C1orf61Q13536 156 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TDGQ13569 410 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 BCL7AQ4VC05 210 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 ADAMTSL4Q6UY14 1074 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 ZNF765Q7L2R6 523 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 POC5Q8NA72 575 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 OR1E3Q8WZA6 343 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 GTF2H4Q92759 462 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TP53INP1Q96A56 240 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TOE1Q96GM8 510 aaKnown RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 INSM2Q96T92 566 aaPredicted RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 C1QTNF2Q9BXJ5 285 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TMEM168Q9H0V1 697 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 C8orf4Q9NR00 106 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 CUEDC1Q9NWM3 386 aaPredicted RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 SPTBP11277 2137 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 MYO1GB0I1T2 1018 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 TBX1O43435 398 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 VEGFDO43915 354 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 AP1S2P56377 157 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 VBP1P61758 197 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 MRPS15P82914 257 aaKnown RBP10.2□□□□□ -0.78
TPM3-212ENST00000368533 TAP2Q03519 686 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 LAPTM4AQ15012 233 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 SPAG17Q6Q759 2223 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 LRRC70Q7Z2Q7 622 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 THAP5Q7Z6K1 395 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 OR9A1PQ8NGU1 263 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 RAB2BQ8WUD1 216 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 NRBF2Q96F24 287 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 OR51B5Q9H339 312 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 NTN4Q9HB63 628 aa10.2□□□□□ -0.78
TPM3-212ENST00000368533 CACNB4O00305 520 aaPredicted RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 KMOO15229 486 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CCNKO75909 580 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CELA2BP08218 269 aaPredicted RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 HOXB3P14651 431 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms