RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 UBE2ZQ9H832 354 aaPredicted RBP11.14□□□□□ -0.63
SYNE1-204ENST00000367248 RMI1Q9H9A7 625 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 NPIPA1Q9UND3 350 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 RGPD5Q99666 1765 aa11.14□□□□□ -0.63
SYNE1-204ENST00000367248 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 PROS1P07225 676 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ALG1LQ6GMV1 187 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 NXPE4Q6UWF7 544 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ANKRD33Q7Z3H0 272 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 RAB8BQ92930 207 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 HSH2DQ96JZ2 352 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 SLC12A9Q9BXP2 914 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 PRODH2Q9UF12 536 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 LAMB4A4D0S4 1761 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 EME2A4GXA9 379 aaPredicted RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 SOX1O00570 391 aaPredicted RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 RNH1P13489 461 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 DNAJA1P31689 397 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 PRPF38BQ5VTL8 546 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 BOLLQ8N9W6 283 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 TMIEQ8NEW7 156 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 OR5P2Q8WZ92 322 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ACTR3BQ9P1U1 418 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ATXN7L1Q9ULK2 861 aaPredicted RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 MAN2B2Q9Y2E5 1009 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 CER1O95813 267 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 FPR1P21462 350 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ARF5P84085 180 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 PDYNP01213 254 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 KCNC1P48547 511 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 NR0B1P51843 470 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 RAB14P61106 215 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 DENND5AQ6IQ26 1287 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 RTN4RL1Q86UN2 441 aaPredicted RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 MOAP1Q96BY2 351 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 KCNC2Q96PR1 638 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 FARSBQ9NSD9 589 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 C11orf98E9PRG8 122 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 CREG1O75629 220 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 GP1BBP13224 206 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ST3GAL3Q11203 375 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 BTBD16Q32M84 506 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ZNF789Q5FWF6 425 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 TMEM225Q6GV28 225 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 REEP3Q6NUK4 255 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 DUS1LQ6P1R4 473 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 RNF130Q86XS8 419 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 SLAMF7Q9NQ25 335 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 RPL36Q9Y3U8 105 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 CITO14578 2027 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 C1orf226A1L170 272 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 WASHC1A8K0Z3 465 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 H7C0S8 307 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 PSIP1O75475 530 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 LDOC1O95751 146 aaPredicted RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 NPPAP01160 153 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 HLA-FP30511 346 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 SCRN3Q0VDG4 424 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ABHD17BQ5VST6 288 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 KLHL17Q6TDP4 642 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 WASH2PQ6VEQ5 465 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 UTS2BQ765I0 119 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 SDR16C5Q8N3Y7 309 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 LINC00471Q8N535 108 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 MCFD2Q8NI22 146 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 DIO2Q92813 273 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 C1orf21Q9H246 121 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 UPB1Q9UBR1 384 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 ZFR2Q9UPR6 939 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 CCL26Q9Y258 94 aa11.13□□□□□ -0.63
SYNE1-204ENST00000367248 PTRH2Q9Y3E5 179 aaKnown RBP11.13□□□□□ -0.63
SYNE1-204ENST00000367248 NHSL1Q5SYE7 1610 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 SLC16A8O95907 504 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 RENP00797 406 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 F11P03951 625 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 S100GP29377 79 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 SYT16Q17RD7 645 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ANKRD54Q6NXT1 300 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 LIPIQ6XZB0 460 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ISCA2Q86U28 154 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PNPLA1Q8N8W4 532 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 AIG1Q9NVV5 245 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 SHISA7A6NL88 538 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PRAMEF26H0Y7S4 382 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 SLC30A4O14863 429 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PRODHO43272 600 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 AHSA1O95433 338 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 HSD11B1P28845 292 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 RGRP47804 291 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 RHDQ02161 417 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 OR52E8Q6IFG1 317 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 FAM180BQ6P0A1 224 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms