RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 TRAF4Q9BUZ4 470 aaPredicted RBP11.3□□□□□ -0.6
PRKN-206ENST00000366898 SLC39A8Q9C0K1 460 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 OSGEPL1Q9H4B0 414 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 GLOD4Q9HC38 313 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 ABCC13Q9NSE7 274 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 RPL36Q9Y3U8 105 aaKnown RBP11.3□□□□□ -0.6
PRKN-206ENST00000366898 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 C5orf51A6NDU8 294 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 NPEPPSL1A6NEC2 478 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 M0R129 80 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 EPORP19235 508 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 CAPN3P20807 821 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 DSC2Q02487 901 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 PRKCZQ05513 592 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 PRKCDQ05655 676 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 NPRL3Q12980 569 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 CNIH2Q6PI25 160 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 MSANTD1Q6ZTZ1 278 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 C16orf59Q7L2K0 433 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 EXOSC8Q96B26 276 aaKnown RBP11.3□□□□□ -0.6
PRKN-206ENST00000366898 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 OR10A4Q9H209 315 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 RNF167Q9H6Y7 350 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 AGO3Q9H9G7 860 aaKnown RBP11.3□□□□□ -0.6
PRKN-206ENST00000366898 LRTM1Q9HBL6 345 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 GALPQ9UBC7 116 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
PRKN-206ENST00000366898 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
PRKN-206ENST00000366898 TLX2O43763 284 aaPredicted RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 LCMT2O60294 686 aaKnown RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 PCDHGA12O60330 932 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 GADD45GO95257 159 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ANXA8P13928 327 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 DNAJB2P25686 324 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 VIPR1P32241 457 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 DCTP40126 519 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 MNDAP41218 407 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 KIAA1161Q6NSJ0 714 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 LRRC46Q96FV0 321 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 SEMA3CQ99985 751 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 AKIP1Q9NQ31 210 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 GFOD1Q9NXC2 390 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ARL15Q9NXU5 204 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 NPAP1Q9NZP6 1156 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 MARCH2Q9P0N8 246 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 MAFFQ9ULX9 164 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 QSER1Q2KHR3 1735 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ZNF705GA8MUZ8 300 aaPredicted RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 RFXAPO00287 272 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 PCDH17O14917 1159 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 OTCP00480 354 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 SLC1A2P43004 574 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 AKR1C2P52895 323 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 MLLT6P55198 1093 aaPredicted RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 AKR1C1Q04828 323 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 DUSP7Q16829 419 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 COL28A1Q2UY09 1125 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 PRAMEF17Q5VTA0 474 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 NADSYN1Q6IA69 706 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ARL9Q6T311 187 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ZNF730Q6ZMV8 503 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 BEND7Q8N7W2 519 aaPredicted RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 ZFR2Q9UPR6 939 aaKnown RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 ASB4Q9Y574 426 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 TNPO3Q9Y5L0 923 aaKnown RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 A0A075B6Q4 140 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 STX16O14662 325 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 FPGTO14772 594 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 PROM1O43490 865 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ARSBP15848 533 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 APEX1P27695 318 aaKnown RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 RENBPP51606 427 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ENTHD1Q8IYW4 607 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 STYXQ8WUJ0 223 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 LINGO1Q96FE5 620 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 ZDHHC12Q96GR4 267 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 MCCC1Q96RQ3 725 aaPredicted RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 RIOK2Q9BVS4 552 aaKnown RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 ACTR6Q9GZN1 396 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 POLR2J3Q9H1A7 115 aaKnown RBP11.29□□□□□ -0.6
PRKN-206ENST00000366898 BPIFA1Q9NP55 256 aa11.29□□□□□ -0.6
PRKN-206ENST00000366898 TGM6O95932 706 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 MBP02144 154 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 SRPRAP08240 638 aaKnown RBP11.28□□□□□ -0.6
PRKN-206ENST00000366898 PPP2R1BP30154 601 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 HK3P52790 923 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 ARF3P61204 181 aaPredicted RBP11.28□□□□□ -0.6
PRKN-206ENST00000366898 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
PRKN-206ENST00000366898 GRIK2Q13002 908 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 TARDBPQ13148 414 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRKN-206ENST00000366898 OPCMLQ14982 345 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 AKR1C8PQ5T2L2 129 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 DEFB128Q7Z7B8 93 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 VTCN1Q7Z7D3 282 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 TCEANCQ8N8B7 351 aa11.28□□□□□ -0.6
PRKN-206ENST00000366898 KDM1BQ8NB78 822 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms