RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 TRAM1L1Q8N609 369 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 GPR26Q8NDV2 337 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 OR13C4Q8NGS5 318 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 OR6Y1Q8NGX8 325 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 CCL4L1Q8NHW4 92 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 MAPK15Q8TD08 544 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 BRSK1Q8TDC3 778 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 SNF8Q96H20 258 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 ZNF778Q96MU6 729 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 RANBP9Q96S59 729 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 CCDC3Q9BQI4 270 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 MECRQ9BV79 373 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 GSDMCQ9BYG8 508 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 ABCG4Q9H172 646 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 DPH5Q9H2P9 285 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 SPATS2LQ9NUQ6 558 aaKnown RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 HACD3Q9P035 362 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 TAAR2Q9P1P5 351 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 GTF2A1LQ9UNN4 478 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 UBE2J1Q9Y385 318 aaPredicted RBP7.54□□□□□ -1.2
YBX3-204ENST00000366290 TENM4Q6N022 2769 aa7.54□□□□□ -1.2
YBX3-204ENST00000366290 ATMQ13315 3056 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 A0A087WV48 116 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 CCDC187A0A096LP49 1063 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 A0A1W2PQM1 296 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 CPED1A4D0V7 1026 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 A6NCN8 305 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 CHUKO15111 745 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 CSO75390 466 aaKnown RBP7.53□□□□□ -1.2
YBX3-204ENST00000366290 BANF1O75531 89 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 SLC4A1P02730 911 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 TMIGD3P0DMS9 266 aaPredicted RBP7.53□□□□□ -1.2
YBX3-204ENST00000366290 MLNP12872 115 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 MAPK9P45984 424 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 GNPDA1P46926 289 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 FASLGP48023 281 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 CLCNKAP51800 687 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 DRG2P55039 364 aaKnown RBP7.53□□□□□ -1.2
YBX3-204ENST00000366290 XIAPP98170 497 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 ACVR1Q04771 509 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 DNTTIP2Q5QJE6 756 aaKnown RBP7.53□□□□□ -1.2
YBX3-204ENST00000366290 KIRREL2Q6UWL6 708 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 RBM44Q6ZP01 1051 aaKnown RBP7.53□□□□□ -1.2
YBX3-204ENST00000366290 GLT6D1Q7Z4J2 308 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 OR4K2Q8NGD2 314 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 OR13J1Q8NGT2 312 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 DNAJC1Q96KC8 554 aaKnown RBP7.53□□□□□ -1.2
YBX3-204ENST00000366290 UBXN10Q96LJ8 280 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 VPS35Q96QK1 796 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 OR2M4Q96R27 311 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 GPR63Q9BZJ6 419 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 RAB17Q9H0T7 212 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 CCDC134Q9H6E4 229 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 PLAC1Q9HBJ0 212 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 BPIFA1Q9NP55 256 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 KCNK9Q9NPC2 374 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 RRAGDQ9NQL2 400 aaPredicted RBP7.53□□□□□ -1.2
YBX3-204ENST00000366290 TREX1Q9NSU2 369 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 ZDHHC18Q9NUE0 388 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 SLC2A6Q9UGQ3 507 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 PACSIN3Q9UKS6 424 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 TMEM98Q9Y2Y6 226 aa7.53□□□□□ -1.2
YBX3-204ENST00000366290 A0A1W2PNU3 283 aaPredicted RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 D6RAR5 112 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 E7ESA3 106 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 TMX2-CTNND1H3BSU7 103 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 H7C0S8 307 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 EIF3FO00303 357 aaPredicted RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 CCL22O00626 93 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 PRAMEF2O60811 474 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 C1QL1O75973 258 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 NMBRP28336 390 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 CCKBRP32239 447 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 THBS4P35443 961 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 TNNT3P45378 269 aaPredicted RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 NPY2RP49146 381 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 ERVPABLB-1P60509 514 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 B4GALNT1Q00973 533 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 EIF3IQ13347 325 aaKnown RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 FASTKD3Q14CZ7 662 aaKnown RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 FAM153CQ494X1 144 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 GALNTL6Q49A17 601 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 GLE1Q53GS7 698 aaKnown RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 TSTD2Q5T7W7 516 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 PCGF5Q86SE9 256 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 TRIM74Q86UV6 250 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 GALNT13Q8IUC8 556 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 SFTPA2Q8IWL1 248 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 LSMEM2Q8N112 164 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 NAGSQ8N159 534 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 SFRP1Q8N474 314 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 ARL14Q8N4G2 192 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 DNAAF3Q8N9W5 541 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 FBXO25Q8TCJ0 367 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 NPIPB3Q92617 1050 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 ART4Q93070 314 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 GLYATL1Q969I3 302 aa7.52□□□□□ -1.21
YBX3-204ENST00000366290 REXO5Q96IC2 774 aaKnown RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 ZNF578Q96N58 590 aaPredicted RBP7.52□□□□□ -1.21
YBX3-204ENST00000366290 KIFC1Q9BW19 673 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms