RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 PARP15Q460N3 678 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 PM20D1Q6GTS8 502 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 NOXA1Q86UR1 476 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 TCAIMQ8N3R3 496 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 PPHLN1Q8NEY8 458 aaKnown RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 OR10Q1Q8NGQ4 319 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 GOT1L1Q8NHS2 421 aaPredicted RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 GRPEL2Q8TAA5 225 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 TSPEARQ8WU66 669 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ZNF583Q96ND8 569 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 CYP2S1Q96SQ9 504 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ACOX2Q99424 681 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 MYOCQ99972 504 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 PRRG3Q9BZD7 231 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ATP13A2Q9NQ11 1180 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 TREX1Q9NSU2 369 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 TRHDEQ9UKU6 1024 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 A0A1W2PQ72 361 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 AGRPO00253 132 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 CCL22O00626 93 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 CPNE3O75131 537 aaKnown RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 MT-CO3P00414 261 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 SPINK2P20155 84 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 EPHA2P29317 976 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 PRDX3P30048 256 aaKnown RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 PKLRP30613 574 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 RFX2P48378 723 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 GPR15P49685 360 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ZNF234Q14588 700 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 OR4D1Q15615 310 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 PFKFB4Q16877 469 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 TYSND1Q2T9J0 566 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 METTL11BQ5VVY1 283 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 C16orf54Q6UWD8 224 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ZNF517Q6ZMY9 492 aaPredicted RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 AHSA2Q719I0 299 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ZSCAN1Q8NBB4 408 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 OR2T11Q8NH01 316 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 OR5K1Q8NHB7 308 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 PIK3R3Q92569 461 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 SNAPC3Q92966 411 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 Q96MT0 163 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 OR2A14Q96R47 310 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 UGT2B28Q9BY64 529 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 GPR27Q9NS67 375 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 SCN3BQ9NY72 215 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ADGRE2Q9UHX3 823 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCL28-201ENST00000361115 PKP3Q9Y446 797 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 NUP214P35658 2090 aaPredicted RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 LOC100506127A0A0U1RQW1 187 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 C1QTNF3-AMACRE9PGA6 284 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 SCO1O75880 301 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 TSPAN9O75954 239 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 WISP3O95389 354 aaPredicted RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 PRR35P0CG20 571 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ITGAMP11215 1152 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 GP1BBP13224 206 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 KRT20P35900 424 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 DGKQP52824 942 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 TPI1P60174 286 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 IL18R1Q13478 541 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 KRR1Q13601 381 aaKnown RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 SLC14A2Q15849 920 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 GLB1L3Q8NCI6 653 aaPredicted RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 TOR1AIP2Q8NFQ8 470 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 OR6B3Q8NGW1 331 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 CDC26Q8NHZ8 85 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 FIBINQ8TAL6 211 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 PROKR1Q8TCW9 393 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 GTF2H4Q92759 462 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 RNF34Q969K3 372 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 NPY6RQ99463 290 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ORAI3Q9BRQ5 295 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ROGDIQ9GZN7 287 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 SEMA4BQ9NPR2 832 aaPredicted RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 RASSF1Q9NS23 344 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 STARD5Q9NSY2 213 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 MAT2BQ9NZL9 334 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 NUFIP1Q9UHK0 495 aaKnown RBP7.41□□□□□ -1.22
CCL28-201ENST00000361115 HCN2Q9UL51 889 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 RNF6Q9Y252 685 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 BTBD3Q9Y2F9 522 aa7.41□□□□□ -1.22
CCL28-201ENST00000361115 ADAMTS9Q9P2N4 1935 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 MEIOCA2RUB1 952 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 HMX3A6NHT5 357 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 FAM25AB3EWG3 89 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 FAM25CB3EWG5 89 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 FAM25GB3EWG6 89 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 NEDD8-MDP1E9PL57 170 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 H0YC42 278 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 TFECO14948 347 aaPredicted RBP7.4□□□□□ -1.22
CCL28-201ENST00000361115 STC2O76061 302 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 RECQL5O94762 991 aaPredicted RBP7.4□□□□□ -1.22
CCL28-201ENST00000361115 MED26O95402 600 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 MTHFD2P13995 350 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 M6PRP20645 277 aa7.4□□□□□ -1.22
CCL28-201ENST00000361115 RBMS1P29558 406 aaKnown RBP7.4□□□□□ -1.22
CCL28-201ENST00000361115 MVKQ03426 396 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms