RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 IDNKQ5T6J7 187 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 COMMD6Q7Z4G1 85 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 NANOGNBQ7Z5D8 188 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 MARCH9Q86YJ5 346 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF248Q8NDW4 579 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 GTF2H4Q92759 462 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 MAELQ96JY0 434 aaKnown RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 ZFP3Q96NJ6 502 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 HERC2P3Q9BVR0 1158 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 MGAT4BQ9UQ53 548 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 PMF1-BGLAPU3KQ54 211 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 H3BMQ9 156 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 LSM1O15116 133 aaKnown RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 SCAMP2O15127 329 aaKnown RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 APOL3O95236 402 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 SYN1P17600 705 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 PSMD4P55036 377 aaKnown RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 NCS1P62166 190 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 GINS1Q14691 196 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 TMEM207Q6UWW9 146 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 GPR135Q8IZ08 494 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 GHDCQ8N2G8 530 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 COG8Q96MW5 612 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 PCDHGA8Q9Y5G5 932 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 PRAMEF12O95522 483 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 OR12D1P0DN82 309 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 GRIA2P42262 883 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 CDH11P55287 796 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 ST3GAL3Q11203 375 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 E2F2Q14209 437 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 SELPLGQ14242 412 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 TMEM44Q2T9K0 475 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 RUNDC3AQ59EK9 446 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 ZSWIM9Q86XI8 627 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 OR5P2Q8WZ92 322 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 PIP5K1AQ99755 562 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 MMP27Q9H306 513 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 POLE4Q9NR33 117 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 DCAF13Q9NV06 445 aaKnown RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 SUZ12Q15022 739 aaKnown RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 SLC36A3Q495N2 470 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 EIPR1Q53HC9 387 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 FRRS1Q6ZNA5 592 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 Q6ZSR9 355 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 TSPYL5Q86VY4 417 aaPredicted RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 DCP2Q8IU60 420 aaKnown RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 NAGSQ8N159 534 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF689Q96CS4 500 aaPredicted RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 NTMT1Q9BV86 223 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 TMEM45AQ9NWC5 275 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 GRXCR2A6NFK2 248 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 CD72P21854 359 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 MLLT1Q03111 559 aaPredicted RBP15.69■□□□□ 0.1
SCAF1-201ENST00000360565 ELAVL3Q14576 367 aaKnown RBP15.69■□□□□ 0.1
SCAF1-201ENST00000360565 CST9Q5W186 159 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 TMC8Q8IU68 726 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 SLC5A8Q8N695 610 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 MGLLQ99685 303 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 MND1Q9BWT6 205 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 NPLQ9BXD5 320 aaPredicted RBP15.69■□□□□ 0.1
SCAF1-201ENST00000360565 TNFRSF10DQ9UBN6 386 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 CEPT1Q9Y6K0 416 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 UBE2QL1A1L167 161 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 AREL1O15033 823 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 DPP6P42658 865 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 OMPP47874 163 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 PGDP52209 483 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 RAB25P57735 213 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 NFE2L1Q14494 772 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 DHCR24Q15392 516 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 NDUFA9Q16795 377 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 TUBA3EQ6PEY2 450 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 RIPOR3Q96MK2 946 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 KATNBL1Q9H079 304 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 FAM92AA1XBS5 289 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 CCRL2O00421 344 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 MAGEB3O15480 346 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 AKAP8O43823 692 aaKnown RBP15.69■□□□□ 0.1
SCAF1-201ENST00000360565 SLC5A2P31639 672 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 NIPAL1Q6NVV3 410 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 HSDL2Q6YN16 418 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF551Q7Z340 670 aaPredicted RBP15.69■□□□□ 0.1
SCAF1-201ENST00000360565 C6orf120Q7Z4R8 191 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 KLHL36Q8N4N3 616 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 OR6K6Q8NGW6 343 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 P2RY13Q9BPV8 354 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 EHD1Q9H4M9 534 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 LHX3Q9UBR4 397 aa15.69■□□□□ 0.1
SCAF1-201ENST00000360565 LAMB2P55268 1798 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 MCIDASD6RGH6 385 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF195O14628 629 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 NDUFS1P28331 727 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 BCAP31P51572 246 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 BNC1Q01954 994 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 CDK5R2Q13319 367 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 COL9A2Q14055 689 aaPredicted RBP15.68■□□□□ 0.1
SCAF1-201ENST00000360565 TAF13Q15543 124 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 ARL9Q6T311 187 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 NXPE4Q6UWF7 544 aa15.68■□□□□ 0.1
SCAF1-201ENST00000360565 CDH24Q86UP0 819 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms