RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SFTPDP35247 375 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 CHRNA4P43681 627 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PRKCZQ05513 592 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TMEM201Q5SNT2 666 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 C9orf57Q5W0N0 161 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TMEM198Q66K66 360 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 LRFN4Q6PJG9 635 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 DPAGT1Q9H3H5 408 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PRTFDC1Q9NRG1 225 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 MAGEL2Q9UJ55 1249 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 OR6C74A6NCV1 312 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TCAPO15273 167 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 ROR2Q01974 943 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 FAM26DQ5JW98 314 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 MON1AQ86VX9 555 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 EPS8L1Q8TE68 723 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 LPGAT1Q92604 370 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 KCNN1Q92952 543 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 PTCHD1Q96NR3 888 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 COL21A1Q96P44 957 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 RBM4BQ9BQ04 359 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 OPA3Q9H6K4 179 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
CHD3-202ENST00000358181 TMEM184BQ9Y519 407 aaPredicted RBP9.44□□□□□ -0.9
CHD3-202ENST00000358181 HSPB6O14558 160 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ORC5O43913 435 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 AIREO43918 545 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 MAFO75444 373 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 OR4F21O95013 312 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 HTR3BO95264 441 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 IL32P24001 234 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 MMP14P50281 582 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 LGALS4P56470 323 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 HNF4GQ14541 408 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 FANK1Q8TC84 345 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ZFP90Q8TF47 636 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 DLG3Q92796 817 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 EPHA6Q9UF33 1036 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PADI3Q9ULW8 664 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PCDHGA5Q9Y5G8 931 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 A0A1W2PRB8 838 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ZNF254O75437 659 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 SLC2A2P11168 524 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 PLCXD2Q0VAA5 305 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PRKD1Q15139 912 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 SLC1A5Q15758 541 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 SMYD5Q6GMV2 418 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 VSTM1Q6UX27 236 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ZPBP2Q6X784 338 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 TOP6BLQ8N6T0 577 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHD3-202ENST00000358181 SHKBP1Q8TBC3 707 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 WDR20Q8TBZ3 569 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 IL1F10Q8WWZ1 152 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 HDAC2Q92769 488 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 ZDHHC16Q969W1 377 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ACDQ96AP0 544 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 DHRS9Q9BPW9 319 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 SMOXQ9NWM0 555 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ACSL6Q9UKU0 697 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 EDARQ9UNE0 448 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 CHADO15335 359 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 LRRTM2O43300 516 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PRICKLE3O43900 615 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 RPLP0P05388 317 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 ITGA2BP08514 1039 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 BMP1P13497 986 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 TAS2R39P59534 338 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 OR8B8Q15620 311 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 SHISA6Q6ZSJ9 500 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 RPLP0P6Q8NHW5 317 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 IL4I1Q96RQ9 567 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 MND1Q9BWT6 205 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 HRASLS2Q9NWW9 162 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 FRMPD1Q5SYB0 1578 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 WNT9AO14904 365 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 INSIG1O15503 277 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 DIRAS3O95661 229 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 F10P00742 488 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 BMP4P12644 408 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 RALGPS1Q5JS13 557 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 OR2A12Q8NGT7 310 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 RRNAD1Q96FB5 475 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 AURKBQ96GD4 344 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 DUSP16Q9BY84 665 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 KCNMB3Q9NPA1 279 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 IQGAP1P46940 1657 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 DUX1O43812 170 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 GTF2F2P13984 249 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ANXA7P20073 488 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 BMP8BP34820 402 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 EPHA5P54756 1037 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ECT2LQ008S8 904 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 GRB7Q14451 532 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 ZNF776Q68DI1 518 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 BMP8AQ7Z5Y6 402 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 NFKBIDQ8NI38 313 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms