RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SMYD1Q8NB12 490 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 TANKQ92844 425 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 HSPBAP1Q96EW2 488 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 FUNDC2Q9BWH2 189 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ZDHHC5Q9C0B5 715 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CHST8Q9H2A9 424 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 DUSP21Q9H596 190 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CCDC177Q9NQR7 707 aaPredicted RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 SCN3BQ9NY72 215 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 MMP17Q9ULZ9 603 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 VPS4AQ9UN37 437 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ABCG2Q9UNQ0 655 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 TMX2-CTNND1H3BSU7 103 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 GFRA3O60609 400 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 CBFA2T3O75081 653 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF182P17025 639 aaPredicted RBP13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 AGXTP21549 392 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 CSNK2BP67870 215 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 MVKQ03426 396 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 TAP2Q03519 686 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF763Q0D2J5 394 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 RAPSNQ13702 412 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 TMEM92Q6UXU6 159 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 FAM83HQ6ZRV2 1179 aaPredicted RBP13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 SYT13Q7L8C5 426 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 DSG4Q86SJ6 1040 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 OR4A15Q8NGL6 344 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 ZFP90Q8TF47 636 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 ERLEC1Q96DZ1 483 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 PLEKHA8Q96JA3 519 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 HSH2DQ96JZ2 352 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 EPYCQ99645 322 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 DPH2Q9BQC3 489 aaPredicted RBP13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 HDAC8Q9BY41 377 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 BHLHE41Q9C0J9 482 aaPredicted RBP13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 REEP4Q9H6H4 257 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 WARS2Q9UGM6 360 aaKnown RBP13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 FZD4Q9ULV1 537 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 EXO1Q9UQ84 846 aaKnown RBP13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 U3KQV3 271 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 GVINP1Q7Z2Y8 2422 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 PCM1Q15154 2024 aa13.67□□□□□ -0.22
NIPAL3-203ENST00000358028 PTPRZ1P23471 2315 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 RNASET2O00584 256 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 NDUFS2O75306 463 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SP9P0CG40 484 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PCGF2P35227 344 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 P2RY2P41231 377 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 IL12RB1P42701 662 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 DAPP51397 102 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 DMWDQ09019 674 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 GAB1Q13480 694 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 TEAD4Q15561 434 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF385BQ569K4 471 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 FAHD1Q6P587 224 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 ADAMTSL4Q6UY14 1074 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SLC16A12Q6ZSM3 486 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 CEP68Q76N32 757 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 COMMD6Q7Z4G1 85 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 C11orf96Q7Z7L8 435 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 GALNT10Q86SR1 603 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 TSPYL5Q86VY4 417 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SVOPQ8N4V2 548 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PLA2G15Q8NCC3 412 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SETD7Q8WTS6 366 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 COX14Q96I36 57 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 CSF3RQ99062 836 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PITX2Q99697 317 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 OR52A5Q9H2C5 316 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SPNS1Q9H2V7 528 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 RIBC2Q9H4K1 309 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 REEP1Q9H902 201 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 ADPRHL2Q9NX46 363 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SH3BP4Q9P0V3 963 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF282Q9UDV7 671 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 FBXO4Q9UKT5 387 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 NDRG4Q9ULP0 352 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 TMEM98Q9Y2Y6 226 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 GMPPBQ9Y5P6 360 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 hCG_2014768A0A024R1R8 64 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PRR23AA6NEV1 266 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 hCG_2039718K7EN88 272 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 MITFO75030 526 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 GABARAPO95166 117 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 C9P02748 559 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 NTSR1P30989 418 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PXNP49023 591 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 BMXP51813 675 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 GP2P55259 537 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PHEXP78562 749 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 CNTN1Q12860 1018 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 ELOAQ14241 798 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 RGNQ15493 299 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PRAMEF14Q5SWL7 426 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PRAMEF13Q5VWM6 474 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 LCTLQ6UWM7 567 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 ARMCX6Q7L4S7 300 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PDZD3Q86UT5 571 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms