RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 KLHL1Q9NR64 748 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 SLC5A6Q9Y289 635 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 GTF3C1Q12789 2109 aa15.65■□□□□ 0.1
PDLIM7-201ENST00000355572 SAP18O00422 153 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 LRRTM2O43300 516 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 TPP2P29144 1249 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 MSH2P43246 934 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 GPR143P51810 404 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 LIM2P55344 173 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 STXBP1P61764 594 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 NAB1Q13506 487 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 OR1C1Q15619 314 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 UAP1Q16222 522 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 WHAMMP3Q1A5X7 153 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 C1QL3Q5VWW1 255 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 LRRC70Q7Z2Q7 622 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 KRT78Q8N1N4 520 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 BCORP1Q8N888 145 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 UHMK1Q8TAS1 419 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 STAG3L4Q8TBR4 150 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 MAPKAP1Q9BPZ7 522 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 FUT8Q9BYC5 575 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 REXO4Q9GZR2 422 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 ACSS3Q9H6R3 686 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 NMRAL1Q9HBL8 299 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 KCMF1Q9P0J7 381 aa15.64■□□□□ 0.09
PDLIM7-201ENST00000355572 DOPEY1Q5JWR5 2465 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 CACNA1DQ01668 2161 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 NCOA6Q14686 2063 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 URADA6NGE7 173 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 ANKDD1BA6NHY2 528 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 SIX3O95343 332 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 ACSL3O95573 720 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 TGFB1P01137 390 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 CRABP2P29373 138 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 CASP2P42575 452 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 IRF8Q02556 426 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 ELOAQ14241 798 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 MEP1AQ16819 746 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 RNFT1Q5M7Z0 435 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 ZNF787Q6DD87 383 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 TBC1D1Q86TI0 1168 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 LAS2Q8IYD9 372 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 ZNF321PQ8N8H1 164 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 THAP3Q8WTV1 239 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 SCMH1Q96GD3 660 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 TSPAN10Q9H1Z9 355 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 CNOT10Q9H9A5 744 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 LIN28AQ9H9Z2 209 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 CLK4Q9HAZ1 481 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 PRTFDC1Q9NRG1 225 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 DAPP1Q9UN19 280 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 ACOT9Q9Y305 439 aa15.63■□□□□ 0.09
PDLIM7-201ENST00000355572 NCKAP5O14513 1909 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 NAV2Q8IVL1 2488 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 A0A096LPK6 155 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 TMEM200CA6NKL6 621 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 K7EPI3 171 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 PSMD12O00232 456 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 KLK8O60259 260 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 MYO1DO94832 1006 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 RASAL1O95294 804 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 STSP08842 583 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 MAGEA12P43365 314 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 MLF1P58340 268 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 ID2Q02363 134 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 ILF2Q12905 390 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 SETDB1Q15047 1291 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 TBCCQ15814 346 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 C4orf17Q53FE4 359 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 TECRLQ5HYJ1 363 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 RPS19BP1Q86WX3 136 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 RELL1Q8IUW5 271 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 TEX9Q8N6V9 391 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 LRRN4CLQ8ND94 238 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 TTLQ8NG68 377 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 OR7G3Q8NG95 312 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 FAR2Q96K12 515 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 C5orf34Q96MH7 638 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 EFCAB11Q9BUY7 163 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 NPLQ9BXD5 320 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 OR51B5Q9H339 312 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 PNO1Q9NRX1 252 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 ABI3Q9P2A4 366 aa15.62■□□□□ 0.09
PDLIM7-201ENST00000355572 A0A1B0GTL3 188 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 WASHC1A8K0Z3 465 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 B3GALT2O43825 422 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 ZG16O60844 167 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 LDB3O75112 727 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 PRKRAO75569 313 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 UNC5CO95185 931 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 ETHE1O95571 254 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 S100BP04271 92 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 PCNAP12004 261 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 ATP5A1P25705 553 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 PIK3CGP48736 1102 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 NR0B1P51843 470 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 MTTPP55157 894 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 AP2B1P63010 937 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 SKP1P63208 163 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms