RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 LYNP07948 512 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 ITGA1P56199 1179 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 XIAPP98170 497 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 PLGLB1Q02325 96 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 MXD1Q05195 221 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 ITGADQ13349 1161 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 RNASE12Q5GAN4 147 aaKnown RBP13.14□□□□□ -0.31
SMC6-201ENST00000351948 PERM1Q5SV97 790 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 RNF220Q5VTB9 566 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 LYSMD4Q5XG99 296 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 PDZD3Q86UT5 571 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 ZNF527Q8NB42 609 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 NUP43Q8NFH3 380 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 OR4K17Q8NGC6 315 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 OR52E4Q8NGH9 312 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 RHBDD1Q8TEB9 315 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 MAL2Q969L2 176 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 FBXL8Q96CD0 374 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 CCNB1IP1Q9NPC3 277 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 TM7SF3Q9NS93 570 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 NUP205Q92621 2012 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 IGLV3-10A0A075B6K4 115 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 DCNP07585 359 aaKnown RBP13.14□□□□□ -0.31
SMC6-201ENST00000351948 OR4C11Q6IEV9 310 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 NUP54Q7Z3B4 507 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 AMER2Q8N7J2 671 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 PYURFQ96I23 114 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 TRIB3Q96RU7 358 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 GAL3ST1Q99999 423 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 CHCHD6Q9BRQ6 235 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 LYARQ9NX58 379 aaKnown RBP13.14□□□□□ -0.31
SMC6-201ENST00000351948 SIT1Q9Y3P8 196 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 H3BSH0 61 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 CASKO14936 926 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 SNNO75324 88 aaPredicted RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 FBLP22087 321 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 CERS1P27544 350 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 CAPGP40121 348 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 DUSP3P51452 185 aaPredicted RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 ADARP55265 1226 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 DAG1Q14118 895 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 ZNF77Q15935 545 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 KANK2Q63ZY3 851 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 REEP3Q6NUK4 255 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 HSDL2Q6YN16 418 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 SMURF2Q9HAU4 748 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 KNTC1P50748 2209 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 ATP5A1P25705 553 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 CD38P28907 300 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 PIK3CBP42338 1070 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 RPS15AP62244 130 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 FLYWCH1Q4VC44 716 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 B3GNT6Q6ZMB0 384 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 ZNF480Q8WV37 535 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 L3HYPDHQ96EM0 354 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 RIMKLBQ9ULI2 386 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 BLOC1S5-TXNDC5H3BN57 136 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 MC1RQ01726 317 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 ZSWIM7Q19AV6 140 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 ZNF630Q2M218 657 aaPredicted RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 CYP4V2Q6ZWL3 525 aaPredicted RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 UTS2BQ765I0 119 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 OAFQ86UD1 273 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 TBC1D17Q9HA65 648 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 ABCB10Q9NRK6 738 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 INTS6Q9UL03 887 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 PIM1P11309 404 aaPredicted RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 RNH1P13489 461 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 HOXB6P17509 224 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 CSNK1DP48730 415 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 WSCD2Q2TBF2 565 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 NDUFAF5Q5TEU4 345 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 PLXDC1Q8IUK5 500 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 TEX26Q8N6G2 289 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 THUMPD1Q9NXG2 353 aaKnown RBP13.13□□□□□ -0.31
SMC6-201ENST00000351948 RAB26Q9ULW5 256 aa13.13□□□□□ -0.31
SMC6-201ENST00000351948 NADKO95544 446 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 ETFAP13804 333 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 OR4D2P58180 307 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 RHDQ02161 417 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 C11orf88Q6PI97 169 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 NATD1Q8N6N6 113 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 NODALQ96S42 347 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 COQ7Q99807 217 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 SPRTNQ9H040 489 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 CUEDC1Q9NWM3 386 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 ACTR10Q9NZ32 417 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 MED31Q9Y3C7 131 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 MYL9P24844 172 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 NSDHLQ15738 373 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 SLC35F1Q5T1Q4 408 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 C6orf120Q7Z4R8 191 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 SLC15A3Q8IY34 581 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 ZZZ3Q8IYH5 903 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 FBXO27Q8NI29 283 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 SH3GL3Q99963 347 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms