RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 BTNL2Q9UIR0 455 aa11.69□□□□□ -0.54
SMAD9-201ENST00000350148 CNOT11Q9UKZ1 510 aaKnown RBP11.69□□□□□ -0.54
SMAD9-201ENST00000350148 PMF1-BGLAPU3KQ54 211 aa11.69□□□□□ -0.54
SMAD9-201ENST00000350148 LRRC14BA6NHZ5 514 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 BIKQ13323 160 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 UAP1L1Q3KQV9 507 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF311Q5JNZ3 666 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 LCN8Q6JVE9 175 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 ZZZ3Q8IYH5 903 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF683Q8IZ20 524 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 IPCEF1Q8WWN9 437 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-201ENST00000350148 DGAT2Q96PD7 388 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 CCM2LQ9NUG4 571 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-201ENST00000350148 NFKBIL1Q9UBC1 381 aaPredicted RBP11.68□□□□□ -0.54
SMAD9-201ENST00000350148 LIPT1Q9Y234 373 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 BOLA2-SMG1P6H3BVE0 249 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 TFPTP0C1Z6 253 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 COX10Q12887 443 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 REEP3Q6NUK4 255 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 LETMD1Q6P1Q0 360 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 FAM217AQ8IXS0 508 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 METTL25Q8N6Q8 603 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 IRF2BPLQ9H1B7 796 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 EPHA6Q9UF33 1036 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 PLAGL1Q9UM63 463 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 DFNA5O60443 496 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 SLC16A8O95907 504 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 AK1P00568 194 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 HPRP00739 348 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 PHC1P78364 1004 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 RBM48Q5RL73 367 aaKnown RBP11.68□□□□□ -0.54
SMAD9-201ENST00000350148 KHDRBS2Q5VWX1 349 aaKnown RBP11.68□□□□□ -0.54
SMAD9-201ENST00000350148 CAMKK1Q8N5S9 505 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF248Q8NDW4 579 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 NDC1Q9BTX1 674 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 SERTAD3Q9UJW9 196 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 POFUT2Q9Y2G5 429 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 ARHGEF33A8MVX0 844 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 FZD6O60353 706 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 P2RY2P41231 377 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 DPTQ07507 201 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 MTAPQ13126 283 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 NFATC4Q14934 902 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 IRF4Q15306 451 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 SNAP47Q5SQN1 464 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 C11orf88Q6PI97 169 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 SLC15A3Q8IY34 581 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 OR4K14Q8NGD5 310 aa11.68□□□□□ -0.54
SMAD9-201ENST00000350148 APOBEC3BQ9UH17 382 aaKnown RBP11.68□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF12P17014 697 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 ARNTP27540 789 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 ATP6AP1Q15904 470 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 SFT2D3Q587I9 215 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 VANGL1Q8TAA9 524 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 WFDC5Q8TCV5 224 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 FCGR1BQ92637 280 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 OR6C2Q9NZP2 312 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 EFCAB10A6NFE3 127 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 PRKD3O94806 890 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 APOL3O95236 402 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 C1orf105O95561 183 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 C9P02748 559 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 ENDOUP21128 410 aaKnown RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 ALAS2P22557 587 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 KCNC4Q03721 635 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 MERTKQ12866 999 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 PIGGQ5H8A4 983 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 OR4C11Q6IEV9 310 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 OR52E8Q6IFG1 317 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 C14orf105Q9NVL8 296 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 NUMBLQ9Y6R0 609 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 C5orf67F2Z3F1 127 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 FOXD2O60548 495 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 C6orf47O95873 294 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 HSMCR30P0CW71 290 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 JUNDP17535 347 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 AGXTP21549 392 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 CTSKP43235 329 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 RPL6Q02878 288 aaKnown RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 TYW3Q6IPR3 259 aaKnown RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 SHQ1Q6PI26 577 aaKnown RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF527Q8NB42 609 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 RPLP0P6Q8NHW5 317 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 BIRC8Q96P09 236 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 HDHD2Q9H0R4 259 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 MTG2Q9H4K7 406 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 PEX11BO96011 259 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 MTHFD1P11586 935 aaKnown RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 GPX3P22352 226 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 CDH12P55289 794 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 CMPK2Q5EBM0 449 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 PSMA8Q8TAA3 256 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 RFKQ969G6 155 aa11.67□□□□□ -0.54
SMAD9-201ENST00000350148 ZC3H10Q96K80 434 aaKnown RBP11.67□□□□□ -0.54
SMAD9-201ENST00000350148 FOXE1O00358 373 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 RGS10O43665 173 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 STX11O75558 287 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 CLEC3AO75596 197 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 SLCO2B1O94956 709 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms