RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PCBP4P57723 403 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ACTR1AP61163 376 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ADARB1P78563 741 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 RELAQ04206 551 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 VAC14Q08AM6 782 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 MERTKQ12866 999 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 EIF2B5Q13144 721 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 FADDQ13158 208 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 FZD5Q13467 585 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 APOFQ13790 326 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 DAG1Q14118 895 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ELOAQ14241 798 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 LRRC32Q14392 662 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 GAS6Q14393 721 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 KIR2DS3Q14952 304 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 MLC1Q15049 377 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 KIAA1614Q5VZ46 1190 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 OR4C11Q6IEV9 310 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ABHD17CQ6PCB6 329 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 IYDQ6PHW0 289 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF852Q6ZMS4 543 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF793Q6ZN11 406 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 CCDC80Q76M96 950 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PIWIL3Q7Z3Z3 882 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 AMIGO1Q86WK6 493 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 NUDT13Q86X67 352 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 LURAP1LQ8IV03 231 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PLD3Q8IV08 490 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ST13P4Q8IZP2 240 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 NAGSQ8N159 534 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ZCCHC7Q8N3Z6 543 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SVOPLQ8N434 492 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 AMER3Q8N944 861 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 C11orf65Q8NCR3 313 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PJA1Q8NG27 643 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 OR13H1Q8NG92 308 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 OR5K1Q8NHB7 308 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PSMA8Q8TAA3 256 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 LCN9Q8WX39 176 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 NCLNQ969V3 563 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 TMBIM1Q969X1 311 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 CIDECQ96AQ7 238 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 MS4A6EQ96DS6 147 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 CNBD2Q96M20 576 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 RDH12Q96NR8 316 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 TEFMQ96QE5 360 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SLC35A5Q9BS91 424 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 DPH7Q9BTV6 452 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ADI1Q9BV57 179 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 TMEM168Q9H0V1 697 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 RAD21L1Q9H4I0 556 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 TMEM38AQ9H6F2 299 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 C6orf106Q9H6K1 298 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SYNPO2LQ9H987 977 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 CD320Q9NPF0 282 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 IL1RAPQ9NPH3 570 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SLAMF7Q9NQ25 335 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PRDM7Q9NQW5 492 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SIRT3Q9NTG7 399 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ACSS1Q9NUB1 689 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SMPD3Q9NY59 655 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 WSB2Q9NYS7 404 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 TAS2R9Q9NYW1 312 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 EHD3Q9NZN3 535 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SPASTQ9UBP0 616 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 RPS6KA6Q9UK32 745 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 UTS2RQ9UKP6 389 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PCDHGA4Q9Y5G9 962 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 KLK4Q9Y5K2 254 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 F5P12259 2224 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PCM1Q15154 2024 aa6.59□□□□□ -1.36
TRIM55-203ENST00000350034 NAV2Q8IVL1 2488 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 SPTY2D1-AS1A0A0U1RR47 76 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 FAM221BA6H8Z2 402 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 TRIM64CA6NLI5 447 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 C4orf51C9J302 202 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 H3BNH8 94 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 PPM1DO15297 605 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 RASGRP1O95267 797 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 FKBP9O95302 570 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 TNFAIP8O95379 198 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 H6PDO95479 791 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 KRT75O95678 551 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 CST1P01037 141 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 TNFP01375 233 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 ALPLP05186 524 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 ARAFP10398 606 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 HOXB3P14651 431 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF23P17027 643 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 CD6P30203 668 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 GRK3P35626 688 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 CAPGP40121 348 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 DCTP40126 519 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 TSFMP43897 325 aaKnown RBP6.58□□□□□ -1.36
TRIM55-203ENST00000350034 ALDH3A2P51648 485 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 ARSFP54793 590 aa6.58□□□□□ -1.36
TRIM55-203ENST00000350034 PCBP3P57721 371 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms