RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 IGKV3D-11A0A0A0MRZ8 115 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 G3V2L1 256 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 FOXE1O00358 373 aaPredicted RBP20.78■□□□□ 0.92
SNX3-202ENST00000349379 PPP6CO00743 305 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 PROCP04070 461 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 IMPDH1P20839 514 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 CDH13P55290 713 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 RPS13P62277 151 aaKnown RBP20.78■□□□□ 0.92
SNX3-202ENST00000349379 CLCQ05315 142 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 KLRB1Q12918 225 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 DDX39BQ13838 428 aaKnown RBP20.78■□□□□ 0.92
SNX3-202ENST00000349379 ABRAXAS2Q15018 415 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 IGFL3Q6UXB1 125 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 TRABD2AQ86V40 505 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 OR4F6Q8NGB9 312 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 ADAMTS18Q8TE60 1221 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 MTERF1Q99551 399 aaKnown RBP20.78■□□□□ 0.92
SNX3-202ENST00000349379 ROGDIQ9GZN7 287 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 LHPPQ9H008 270 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 OR51B5Q9H339 312 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 MKS1Q9NXB0 559 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 GRID1Q9ULK0 1009 aa20.78■□□□□ 0.92
SNX3-202ENST00000349379 TLDC2A0PJX2 215 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 FAM227AF5H4B4 570 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 PSMD12O00232 456 aaPredicted RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 RTCAO00442 366 aaKnown RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 PLIN3O60664 434 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 B4GALT2O60909 372 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 OTCP00480 354 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 SERPINA7P05543 415 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 PRR35P0CG20 571 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 KRT4P19013 534 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 ATP5A1P25705 553 aaKnown RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 TSFMP43897 325 aaKnown RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 CCT5P48643 541 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 LIM2P55344 173 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 BTG2P78543 158 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 CUL3Q13618 768 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 NSDHLQ15738 373 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 CCDC153Q494R4 210 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 C10orf62Q5T681 223 aaPredicted RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 LETMD1Q6P1Q0 360 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 IGFL2Q6UWQ7 119 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 ZYG11AQ6WRX3 759 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 RIPOR1Q6ZS17 1223 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 KBTBD2Q8IY47 623 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 ACOT4Q8N9L9 421 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 MYRIPQ8NFW9 859 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 PSMF1Q92530 271 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 THOC3Q96J01 351 aaKnown RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 MAGEB10Q96LZ2 347 aaPredicted RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 ZNF717Q9BY31 904 aaPredicted RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 COPS7BQ9H9Q2 264 aaPredicted RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 LYRM4Q9HD34 91 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 PRDM9Q9NQV7 894 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 KCMF1Q9P0J7 381 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 MMACHCQ9Y4U1 282 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 CLDN16Q9Y5I7 305 aa20.77■□□□□ 0.92
SNX3-202ENST00000349379 FASNP49327 2511 aaKnown RBP20.77■□□□□ 0.92
SNX3-202ENST00000349379 IGHV3-20A0A0C4DH32 117 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 CYR61O00622 381 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 PLPP1O14494 284 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 PRMT3O60678 531 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 SUPT7LO94864 414 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 ETHE1O95571 254 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 ALPPP05187 535 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 TSPAN8P19075 237 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 HIST1H1TP22492 207 aaPredicted RBP20.76■□□□□ 0.91
SNX3-202ENST00000349379 PTX3P26022 381 aaPredicted RBP20.76■□□□□ 0.91
SNX3-202ENST00000349379 DEKP35659 375 aaKnown RBP20.76■□□□□ 0.91
SNX3-202ENST00000349379 PHEXP78562 749 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 IFFO1Q0D2I5 559 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 FRG2Q64ET8 278 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 MILR1Q7Z6M3 343 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 ZNF605Q86T29 641 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 SCUBE1Q8IWY4 988 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 C4orf33Q8N1A6 199 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 RBMXL3Q8N7X1 1067 aaKnown RBP20.76■□□□□ 0.91
SNX3-202ENST00000349379 TMEM52Q8NDY8 209 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 PTCHD1Q96NR3 888 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 FRG2BQ96QU4 278 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 ZNF382Q96SR6 550 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 TRPS1Q9UHF7 1281 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 PLAAQ9Y263 795 aa20.76■□□□□ 0.91
SNX3-202ENST00000349379 HEMK1Q9Y5R4 338 aaPredicted RBP20.76■□□□□ 0.91
SNX3-202ENST00000349379 SPENQ96T58 3664 aaKnown RBP20.75■□□□□ 0.91
SNX3-202ENST00000349379 TCRBV16S1A1N1A0A5B0 115 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 COPEO14579 308 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 DPM1O60762 260 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 SH3BGRLO75368 114 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 CELA2AP08217 269 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 ICAM2P13598 275 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 ARL1P40616 181 aaPredicted RBP20.75■□□□□ 0.91
SNX3-202ENST00000349379 CASRP41180 1078 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 NEK2P51955 445 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 HNRNPFP52597 415 aaKnown RBP20.75■□□□□ 0.91
SNX3-202ENST00000349379 SFT2D3Q587I9 215 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 PLAG1Q6DJT9 500 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 OR4C11Q6IEV9 310 aa20.75■□□□□ 0.91
SNX3-202ENST00000349379 ZCCHC7Q8N3Z6 543 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms