RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PRR5P85299 388 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 RBBP4Q09028 425 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 TBRG1Q3YBR2 411 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 SLC8B1Q6J4K2 584 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 REEP3Q6NUK4 255 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 CLECL1Q8IZS7 167 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 FEVQ99581 238 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 TIGARQ9NQ88 270 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 A0A1B0GTW7 788 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 H0YC42 278 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 RASGRP1O95267 797 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 HSD3B1P14060 373 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 HSD3B2P26439 372 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 KCNC4Q03721 635 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 LINC00471Q8N535 108 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 FAM98AQ8NCA5 519 aaKnown RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 CCDC32Q9BV29 185 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 A8MV72 311 aaPredicted RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 MAN2B1O00754 1011 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 CPNE3O75131 537 aaKnown RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 JRKO75564 520 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 HRH2P25021 359 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 MAD2L1BPQ15013 274 aaPredicted RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 TBC1D25Q3MII6 688 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 PRAMEF14Q5SWL7 426 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 PRAMEF13Q5VWM6 474 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 Q6ZVU0 165 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 TAF8Q7Z7C8 310 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 NUDT13Q86X67 352 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 APIPQ96GX9 242 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 CLMPQ9H6B4 373 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 C8orf33Q9H7E9 229 aaPredicted RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 FBRSQ9HAH7 460 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 IL1RAPQ9NPH3 570 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 GRIP1Q9Y3R0 1128 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 SEC14L2O76054 403 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 KCNC1P48547 511 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 AFF1P51825 1210 aaKnown RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 NCBP2P52298 156 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP50-201ENST00000347635 SLC14A2Q15849 920 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 C2orf27AQ580R0 203 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 ZNF311Q5JNZ3 666 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 TTC9BQ8N6N2 239 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 ASCC1Q8N9N2 400 aaKnown RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 OR6Q1Q8NGQ2 317 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 GTF2H4Q92759 462 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 CAMK1GQ96NX5 476 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 TSSK6Q9BXA6 273 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 MCUBQ9NWR8 336 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 ATP12AP54707 1039 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 ATP13A5Q4VNC0 1218 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 MMAAQ8IVH4 418 aaKnown RBP14.18□□□□□ -0.14
NUP50-201ENST00000347635 B4GALT6Q9UBX8 382 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 PCDHGB5Q9Y5G0 923 aa14.18□□□□□ -0.14
NUP50-201ENST00000347635 MYO18AQ92614 2054 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 FOCADQ5VW36 1801 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 HTR3EA5X5Y0 456 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 SAGP10523 405 aaPredicted RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 TIA1P31483 386 aaKnown RBP eCLIP14.17□□□□□ -0.14
NUP50-201ENST00000347635 CXCR4P61073 352 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 ADARB1P78563 741 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 LGALS3BPQ08380 585 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 HNRNPA0Q13151 305 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 FADDQ13158 208 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 TMEM207Q6UWW9 146 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 MARCH9Q86YJ5 346 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 TICAM1Q8IUC6 712 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 PGBD5Q8N414 524 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 TCEANCQ8N8B7 351 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 TRMT2BQ96GJ1 504 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 CCDC115Q96NT0 180 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 P2RY13Q9BPV8 354 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 ELOVL2Q9NXB9 296 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 NKIRAS2Q9NYR9 191 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 NOTOA8MTQ0 251 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 BPIP17213 487 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 SF1Q15637 639 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 XKR4Q5GH76 650 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 SERPINA11Q86U17 422 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 SLC9A6Q92581 669 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 BTBD1Q9H0C5 482 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 NEUROD4Q9HD90 331 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 ZCCHC3Q9NUD5 404 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 ERVK13-1Q9NX77 482 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 FBXW2Q9UKT8 454 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 FAM155AB1AL88 458 aaPredicted RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 AKAP8O43823 692 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 ALPPP05187 535 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 CKMT1AP12532 417 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 FUT4P22083 530 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 PREPP48147 710 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 CLEC12AQ5QGZ9 265 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 KIAA1161Q6NSJ0 714 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 METTL2BQ6P1Q9 378 aaKnown RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 GPR135Q8IZ08 494 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 OR10G6Q8NH81 332 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 CYB5D2Q8WUJ1 264 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 SLC5A11Q8WWX8 675 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 SLC22A18Q96BI1 424 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 IL17CQ9P0M4 197 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms