RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RBM4Q9BWF3 364 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TMEM121BQ9BXQ6 578 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 AICDAQ9GZX7 198 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DDX31Q9H8H2 851 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TMEM184CQ9NVA4 438 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ZNF624Q9P2J8 865 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 MAP4K5Q9Y4K4 846 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 hCG_2039718K7EN88 272 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 HAT1O14929 419 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 GCM2O75603 506 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SEMA4FO95754 770 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 STATHP02808 62 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 FABP3P05413 133 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 GLULP15104 373 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 FADDQ13158 208 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 LRRC32Q14392 662 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ANKRD34AQ69YU3 496 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 OR4C11Q6IEV9 310 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TRIM40Q6P9F5 258 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 AMIGO1Q86WK6 493 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 RNF130Q86XS8 419 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 RDH12Q96NR8 316 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TEFMQ96QE5 360 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SLAMF7Q9NQ25 335 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 C1GALT1Q9NS00 363 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TEX10Q9NXF1 929 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 VNN3Q9NY84 501 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 USE1Q9NZ43 259 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 OR6C2Q9NZP2 312 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 NDUFA13Q9P0J0 144 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 C5AR2Q9P296 337 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ADAM29Q9UKF5 820 aa13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 NDRG2Q9UN36 371 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP1-202ENST00000346416 MDC1Q14676 2089 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TRBV23OR9-2A0A075B6M9 112 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SMIM31A0A1B0GVY4 71 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ISM1B1AKI9 464 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TNFRSF10CO14798 259 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 AXIN1O15169 862 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TBX19O60806 448 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 OR6B1O95007 311 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DIRAS1O95057 198 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 RASGRP1O95267 797 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 POU3F3P20264 500 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 NDUFS1P28331 727 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 AKT2P31751 481 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SHMT2P34897 504 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SSR2P43308 183 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PRIM2P49643 509 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PLCL1Q15111 1095 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 NADK2Q4G0N4 442 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 GCNT6Q5T4J0 391 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 OR2T5Q6IEZ7 315 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 HIPK1Q86Z02 1210 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 OR2T29Q8NH02 315 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 MUS81Q96NY9 551 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 KLHL31Q9H511 634 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 CXorf36Q9H7Y0 433 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ADPRHL2Q9NX46 363 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PCOLCE2Q9UKZ9 415 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 BAG5Q9UL15 447 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 KLHL20Q9Y2M5 609 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SNX8Q9Y5X2 465 aa13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ARHGEF17Q96PE2 2063 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP1-202ENST00000346416 A0A0A6YYD5 115 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PDPK1O15530 556 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SUV39H1O43463 412 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 KRT75O95678 551 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 CHRM5P08912 532 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 UQCRC2P22695 453 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 CMPK1P30085 196 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 NR1H2P55055 460 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 MANFP55145 182 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SRP54P61011 504 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 YPEL5P62699 121 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 HYAL2Q12891 473 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 BIRC2Q13490 618 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ZIC1Q15915 447 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ALG11Q2TAA5 492 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 KCTD21Q4G0X4 260 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TMEM35AQ53FP2 167 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 KIAA1614Q5VZ46 1190 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 Q6ZS52 159 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 Q6ZSR6 202 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PJA1Q8NG27 643 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TBC1D20Q96BZ9 403 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 EPB41L1Q9H4G0 881 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TMEM38AQ9H6F2 299 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TM9SF3Q9HD45 589 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 USP36Q9P275 1121 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 AP1M2Q9Y6Q5 423 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DGKBQ9Y6T7 804 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 KNL1Q8NG31 2342 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TMEM229AB2RXF0 380 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 HS6ST1O60243 411 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SLC19A1P41440 591 aa13.43□□□□□ -0.26
CDK5RAP1-202ENST00000346416 GSTM5P46439 218 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms