RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 STARD6P59095 220 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 RPS3AP61247 264 aaKnown RBP12.27□□□□□ -0.45
CLK3-201ENST00000345005 SRSF11Q05519 484 aaKnown RBP12.27□□□□□ -0.45
CLK3-201ENST00000345005 UBXN2BQ14CS0 331 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 OXA1LQ15070 435 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 PLCL1Q15111 1095 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 DGUOKQ16854 277 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 RABL3Q5HYI8 236 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 XAF1Q6GPH4 301 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 Q6ZSR6 202 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 MSANTD1Q6ZTZ1 278 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 STK32CQ86UX6 486 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLK3-201ENST00000345005 KIAA2013Q8IYS2 634 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 SETD9Q8NE22 299 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 ABHD11Q8NFV4 315 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 MUL1Q969V5 352 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 ZNF566Q969W8 418 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 SH3YL1Q96HL8 342 aaPredicted RBP12.27□□□□□ -0.45
CLK3-201ENST00000345005 SEPHS2Q99611 448 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 ACAT2Q9BWD1 397 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 LHPPQ9H008 270 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 MAGIXQ9H6Y5 334 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 NT5DC2Q9H857 520 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 RMND5AQ9H871 391 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 DMRT3Q9NQL9 472 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 PRDM6Q9NQX0 595 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 FAM118AQ9NWS6 357 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 TRNAU1APQ9NX07 287 aaKnown RBP12.27□□□□□ -0.45
CLK3-201ENST00000345005 SIRT5Q9NXA8 310 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 WSB2Q9NYS7 404 aaPredicted RBP12.27□□□□□ -0.45
CLK3-201ENST00000345005 SLAMF8Q9P0V8 285 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 ENPP5Q9UJA9 477 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 FBXL21Q9UKT6 434 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 BAG5Q9UL15 447 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 CEP192Q8TEP8 1941 aa12.27□□□□□ -0.45
CLK3-201ENST00000345005 SNRNP200O75643 2136 aaKnown RBP12.27□□□□□ -0.45
CLK3-201ENST00000345005 NUP214P35658 2090 aaPredicted RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 A0A1W2PPV9 198 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 OR52A4PA6NMU1 304 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 GSTA4O15217 222 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 HRH2P25021 359 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 PTX3P26022 381 aaPredicted RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 PKLRP30613 574 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 SERPINB1P30740 379 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 C21orf58P58505 322 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 MEF2AQ02078 507 aaPredicted RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 FZD5Q13467 585 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 ATP1A4Q13733 1029 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 TPRG1LQ5T0D9 272 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 ADNP2Q6IQ32 1131 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 R3HCC1LQ7Z5L2 792 aaKnown RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 C1orf52Q8N6N3 182 aaKnown RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 LINC01555Q8NAE3 123 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 FAM174AQ8TBP5 190 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 NUDT8Q8WV74 236 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 GTF2H4Q92759 462 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 TANKQ92844 425 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 TMBIM1Q969X1 311 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 ITCHQ96J02 903 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 TMEM74Q96NL1 305 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 GPR174Q9BXC1 333 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 RHBGQ9H310 441 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 EPS8L2Q9H6S3 715 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 KIR3DX1Q9H7L2 352 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 NTN4Q9HB63 628 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 LTB4R2Q9NPC1 389 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 GMPR2Q9P2T1 348 aaKnown RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 WARS2Q9UGM6 360 aaKnown RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 NAALAD2Q9Y3Q0 740 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 PCDHB11Q9Y5F2 797 aa12.26□□□□□ -0.45
CLK3-201ENST00000345005 TDRD6O60522 2096 aaKnown RBP12.26□□□□□ -0.45
CLK3-201ENST00000345005 ANKDD1BA6NHY2 528 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 SCAMP1O15126 338 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 UGT2B11O75310 529 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 ERN1O75460 977 aaKnown RBP12.25□□□□□ -0.45
CLK3-201ENST00000345005 RASGRP1O95267 797 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 FKBP9O95302 570 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 ETHE1O95571 254 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 CLIC3O95833 236 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 TNFP01375 233 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 ANXA4P09525 319 aaPredicted RBP12.25□□□□□ -0.45
CLK3-201ENST00000345005 CD247P20963 164 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 PRDX1Q06830 199 aaKnown RBP12.25□□□□□ -0.45
CLK3-201ENST00000345005 PGS1Q32NB8 556 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 OTUD3Q5T2D3 398 aaPredicted RBP12.25□□□□□ -0.45
CLK3-201ENST00000345005 IGFN1Q86VF2 1251 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 HIPK1Q86Z02 1210 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 BPIFB6Q8NFQ5 453 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 OR4K1Q8NGD4 311 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 OR52E1Q8NGJ3 308 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 FAM110BQ8TC76 370 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 EGLN2Q96KS0 407 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 HHIPQ96QV1 700 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 NODALQ96S42 347 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 EBPLQ9BY08 206 aa12.25□□□□□ -0.45
CLK3-201ENST00000345005 NAA50Q9GZZ1 169 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms