RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 TRIM40Q6P9F5 258 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 OR2A12Q8NGT7 310 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 WDR48Q8TAF3 677 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 PPCDCQ96CD2 204 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 TAPBPLQ9BX59 468 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 FBXL12Q9NXK8 326 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 EHD3Q9NZN3 535 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 CFL2Q9Y281 166 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 ENPP4Q9Y6X5 453 aa22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 HELZP42694 1942 aaKnown RBP22.12■■□□□ 1.13
NKX2-3-201ENST00000344586 SH3D21A4FU49 640 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SAP18O00422 153 aaKnown RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 ARHGAP33O14559 1287 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SSX4O60224 188 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SRPRAP08240 638 aaKnown RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 CYP2A6P11509 494 aaPredicted RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 GJA1P17302 382 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 CHMP24386 653 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 RCVRNP35243 200 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SF3B4Q15427 424 aaKnown RBP eCLIP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SPANXN2Q5MJ10 180 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SPOUT1Q5T280 376 aaKnown RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 CELF2-AS1Q8N7Q2 184 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 TIFAQ96CG3 184 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 ZNF232Q9UNY5 417 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 KCNE2Q9Y6J6 123 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 CCRL2O00421 344 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 CHI3L1P36222 383 aaPredicted RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 PNLIPRP1P54315 467 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 TBPL1P62380 186 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 KRR1Q13601 381 aaKnown RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 BRAT1Q6PJG6 821 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SPATC1Q76KD6 591 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 TMC8Q8IU68 726 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SLC7A5P1Q8MH63 180 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 SLC39A11Q8N1S5 342 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 REPS1Q96D71 796 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 TMEM169Q96HH4 297 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 WRAP53Q9BUR4 548 aaKnown RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 NMNAT1Q9HAN9 279 aaPredicted RBP22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 DMRT3Q9NQL9 472 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 RHCGQ9UBD6 479 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 OGDHLQ9ULD0 1010 aa22.11■■□□□ 1.13
NKX2-3-201ENST00000344586 PNMA8CA0A1B0GUJ8 204 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ARRDC5A6NEK1 342 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 WASH3PC4AMC7 463 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 PSMD11O00231 422 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 QSOX1O00391 747 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ATG13O75143 517 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 GPX5O75715 221 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 GASTP01350 101 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 URODP06132 367 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ARAFP10398 606 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 PDHA2P29803 388 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 CNR2P34972 360 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 NR4A2P43354 598 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 SLC15A1P46059 708 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 PRLHRP49683 370 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 DEFA1P59665 94 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 DEFA3P59666 94 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 SP3Q02447 781 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 TIMM50Q3ZCQ8 353 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 PLAG1Q6DJT9 500 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ZNF770Q6IQ21 691 aaPredicted RBP22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 PTCHD4Q6ZW05 846 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 CLIP4Q8N3C7 705 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 WDR36Q8NI36 951 aaKnown RBP22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 C16orf78Q8WTQ4 265 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 BTN2A2Q8WVV5 523 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 MYLIPQ8WY64 445 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 KCNS3Q9BQ31 491 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ZSCAN5AQ9BUG6 496 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 NUAK2Q9H093 628 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 TRBC2A0A5B9 178 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 LOC110117498-PIK3R3F6TDL0 507 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 IFNA14P01570 189 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 POLR2EP19388 210 aaKnown RBP22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 BMPR1AP36894 532 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 CRISP1P54107 249 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 CCL23P55773 120 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 FOXD4Q12950 439 aaPredicted RBP22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 SLBPQ14493 270 aaKnown RBP eCLIP22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 FAM71E1Q6IPT2 247 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 IL17RDQ8NFM7 739 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ZNF480Q8WV37 535 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 PIK3R3Q92569 461 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 OPALINQ96PE5 141 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 YME1L1Q96TA2 773 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 RC3H2Q9HBD1 1191 aaKnown RBP22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 MYNNQ9NPC7 610 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 CLN6Q9NWW5 311 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ENOPH1Q9UHY7 261 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 ANGPT4Q9Y264 503 aa22.1■■□□□ 1.13
NKX2-3-201ENST00000344586 TRAV19A0A0A6YYK7 116 aa22.09■■□□□ 1.13
NKX2-3-201ENST00000344586 FAM227AF5H4B4 570 aa22.09■■□□□ 1.13
NKX2-3-201ENST00000344586 FOXE1O00358 373 aaPredicted RBP22.09■■□□□ 1.13
NKX2-3-201ENST00000344586 CTDSP2O14595 271 aa22.09■■□□□ 1.13
NKX2-3-201ENST00000344586 MPZL2O60487 215 aa22.09■■□□□ 1.13
NKX2-3-201ENST00000344586 RHCEP18577 417 aa22.09■■□□□ 1.13
NKX2-3-201ENST00000344586 PBLDP30039 288 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms