RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PROKR1Q8TCW9 393 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 CT55Q8WUE5 264 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 SLC44A1Q8WWI5 657 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 ATL1Q8WXF7 558 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 N4BP2L2Q92802 583 aaPredicted RBP9.78□□□□□ -0.84
TPM3-207ENST00000341372 RNF31Q96EP0 1072 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 SLC35A4Q96G79 324 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 HIST1H2AHQ96KK5 128 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 HIST1H2AJQ99878 128 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 H2AFJQ9BTM1 129 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 TRIM54Q9BYV2 358 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 SPRTNQ9H040 489 aaPredicted RBP9.78□□□□□ -0.84
TPM3-207ENST00000341372 AKIRIN1Q9H9L7 192 aaPredicted RBP9.78□□□□□ -0.84
TPM3-207ENST00000341372 ARL15Q9NXU5 204 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 IL17BQ9UHF5 180 aa9.78□□□□□ -0.84
TPM3-207ENST00000341372 ACSL3O95573 720 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 CAPN1P07384 714 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 HNRNPCP07910 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
TPM3-207ENST00000341372 RAB40ALP0C0E4 278 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 SLC35E2BP0CK96 405 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 EZRP15311 586 aaKnown RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 CD1DP15813 335 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 DLSTP36957 453 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 ATP6V0D1P61421 351 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 TSNQ15631 228 aaKnown RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 CATSPEREQ5SY80 951 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 STARD8Q92502 1023 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 GBP5Q96PP8 586 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 SYNPO2LQ9H987 977 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 UTP6Q9NYH9 597 aaKnown RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 CTNNAL1Q9UBT7 734 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 KCND3Q9UK17 655 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 SNX7Q9UNH6 387 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 A0A1W2PPL8 197 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 ONECUT2O95948 504 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 KLK3P07288 261 aaPredicted RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 CCDC166P0CW27 439 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 DRD2P14416 443 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 CRABP2P29373 138 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 MAGEA12P43365 314 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 SUMO3P55854 103 aaPredicted RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 NKX6-1P78426 367 aaPredicted RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 NAE1Q13564 534 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 PRTGQ2VWP7 1150 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 CDKL4Q5MAI5 379 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 FRMPD2BQ6IN97 320 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 CAPN13Q6MZZ7 669 aaPredicted RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 FBXO42Q6P3S6 717 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 ESPNLQ6ZVH7 1005 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 TRMT10CQ7L0Y3 403 aaKnown RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 CMC1Q7Z7K0 106 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 ZNF655Q8N720 491 aaPredicted RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 VMP1Q96GC9 406 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 OR2A5Q96R48 311 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 UBL7Q96S82 380 aaPredicted RBP9.77□□□□□ -0.85
TPM3-207ENST00000341372 SELENOSQ9BQE4 189 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 GPR87Q9BY21 358 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 ATG10Q9H0Y0 220 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 CHST8Q9H2A9 424 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 TMEM184CQ9NVA4 438 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 SH2B3Q9UQQ2 575 aa9.77□□□□□ -0.85
TPM3-207ENST00000341372 A0A087WUV0 522 aaPredicted RBP9.76□□□□□ -0.85
TPM3-207ENST00000341372 ITGB2P05107 769 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 ANXA5P08758 320 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 TCN2P20062 427 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 HNMTP50135 292 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 ARSFP54793 590 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 CASP6P55212 293 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 MC1RQ01726 317 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 CDC20Q12834 499 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 MALLQ13021 153 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 TSTA3Q13630 321 aaPredicted RBP9.76□□□□□ -0.85
TPM3-207ENST00000341372 GRM7Q14831 915 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 TGFBIQ15582 683 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 TTMPQ5BVD1 217 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 THEMIS2Q5TEJ8 643 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 LCN10Q6JVE6 187 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 FAM199XQ6PEV8 388 aaPredicted RBP9.76□□□□□ -0.85
TPM3-207ENST00000341372 PCSK4Q6UW60 755 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 ABHD11Q8NFV4 315 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 MR1Q95460 341 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 PTERQ96BW5 349 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 RHBDF1Q96CC6 855 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 WBP1Q96G27 269 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 OR4K3Q96R72 315 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 PAFAH2Q99487 392 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 HAUS8Q9BT25 410 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 CD244Q9BZW8 370 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 MAN2B2Q9Y2E5 1009 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 MRPS18BQ9Y676 258 aaKnown RBP9.76□□□□□ -0.85
TPM3-207ENST00000341372 ATRXP46100 2492 aa9.76□□□□□ -0.85
TPM3-207ENST00000341372 LOC105369274A0A096LPK9 316 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 LOC102723532A0A0G2JNH3 316 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 A0A0J9YVX5 310 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 A0A1B0GX78 115 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 HAT1O14929 419 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 DSCR3O14972 297 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 RIPK2O43353 540 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 GUCA1CO95843 209 aa9.75□□□□□ -0.85
TPM3-207ENST00000341372 ALDOAP04075 364 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms