RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 CALML6Q8TD86 181 aa16.78■□□□□ 0.28
IFT27-201ENST00000340630 MAGOHBQ96A72 148 aaKnown RBP16.78■□□□□ 0.28
IFT27-201ENST00000340630 RUNDC3BQ96NL0 473 aa16.78■□□□□ 0.28
IFT27-201ENST00000340630 OR4K3Q96R72 315 aa16.78■□□□□ 0.28
IFT27-201ENST00000340630 TIMMDC1Q9NPL8 285 aa16.78■□□□□ 0.28
IFT27-201ENST00000340630 PLSCR2Q9NRY7 297 aa16.78■□□□□ 0.28
IFT27-201ENST00000340630 IARS2Q9NSE4 1012 aaKnown RBP16.78■□□□□ 0.28
IFT27-201ENST00000340630 ZFP69BQ9UJL9 534 aa16.78■□□□□ 0.28
IFT27-201ENST00000340630 INTS1Q8N201 2190 aaKnown RBP16.78■□□□□ 0.28
IFT27-201ENST00000340630 NAV3Q8IVL0 2385 aa16.78■□□□□ 0.28
IFT27-201ENST00000340630 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.77■□□□□ 0.28
IFT27-201ENST00000340630 IGKV3D-11A0A0A0MRZ8 115 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 ESYT3A0FGR9 886 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 NPIPA2E9PIF3 369 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 NPIPA3F8WFD2 350 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 MYO1DO94832 1006 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 MLNP12872 115 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 SCTRP47872 440 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 FNTAP49354 379 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 PPIAP62937 165 aaKnown RBP16.77■□□□□ 0.28
IFT27-201ENST00000340630 DR1Q01658 176 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 CSHL1Q14406 222 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 CASP8Q14790 479 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 GXYLT1Q4G148 440 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 DUPD1Q68J44 220 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 PAOXQ6QHF9 649 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 STRA8Q7Z7C7 330 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 OR10Q1Q8NGQ4 319 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 CAVIN3Q969G5 261 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 SPNS1Q9H2V7 528 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 KLHL31Q9H511 634 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 PNO1Q9NRX1 252 aaKnown RBP16.77■□□□□ 0.28
IFT27-201ENST00000340630 ARL15Q9NXU5 204 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 TAS2R13Q9NYV9 303 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 KCMF1Q9P0J7 381 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 ERVK-11Q9UQG0 969 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 MAD1L1Q9Y6D9 718 aa16.77■□□□□ 0.28
IFT27-201ENST00000340630 PABPN1LA6NDY0 278 aaKnown RBP16.76■□□□□ 0.27
IFT27-201ENST00000340630 FAM166BA8MTA8 275 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 KLK8O60259 260 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 KRT14P02533 472 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 ECHS1P30084 290 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 SSR4P51571 173 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 PLGLB1Q02325 96 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 TRADDQ15628 312 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 EMBQ6PCB8 327 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 C16orf47Q6ZP98 133 aaPredicted RBP16.76■□□□□ 0.27
IFT27-201ENST00000340630 KIAA0408Q6ZU52 694 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 CLYBLQ8N0X4 340 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 OR5M9Q8NGP3 310 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 OR56A3Q8NH54 315 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.76■□□□□ 0.27
IFT27-201ENST00000340630 SLCO2A1Q92959 643 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 LINGO1Q96FE5 620 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 SERPINB12Q96P63 405 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 RAB17Q9H0T7 212 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 LIN28AQ9H9Z2 209 aaKnown RBP16.76■□□□□ 0.27
IFT27-201ENST00000340630 CLK4Q9HAZ1 481 aaKnown RBP16.76■□□□□ 0.27
IFT27-201ENST00000340630 XAB2Q9HCS7 855 aaKnown RBP16.76■□□□□ 0.27
IFT27-201ENST00000340630 HOMER3Q9NSC5 361 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 PNPLA3Q9NST1 481 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 DEPPQ9NTK1 212 aa16.76■□□□□ 0.27
IFT27-201ENST00000340630 PINLYPA6NC86 204 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 URADA6NGE7 173 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 HOXB4P17483 251 aaPredicted RBP16.75■□□□□ 0.27
IFT27-201ENST00000340630 AHRP35869 848 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 CDKN2DP55273 166 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 ZNF585AQ6P3V2 769 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 CCDC137Q6PK04 289 aaKnown RBP16.75■□□□□ 0.27
IFT27-201ENST00000340630 CA13Q8N1Q1 262 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 AGGF1Q8N302 714 aaeCLIP16.75■□□□□ 0.27
IFT27-201ENST00000340630 MCUQ8NE86 351 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 SLC5A11Q8WWX8 675 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 NEIL2Q969S2 332 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 NCLNQ969V3 563 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 VMP1Q96GC9 406 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 TSNARE1Q96NA8 513 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 FAM167BQ9BTA0 163 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 SLC6A16Q9GZN6 736 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 SLC24A3Q9HC58 644 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 CCM2LQ9NUG4 571 aaPredicted RBP16.75■□□□□ 0.27
IFT27-201ENST00000340630 DNAJB12Q9NXW2 375 aaKnown RBP16.75■□□□□ 0.27
IFT27-201ENST00000340630 ZNF223Q9UK11 482 aaPredicted RBP16.75■□□□□ 0.27
IFT27-201ENST00000340630 NFU1Q9UMS0 254 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 YARS2Q9Y2Z4 477 aaKnown RBP16.75■□□□□ 0.27
IFT27-201ENST00000340630 HCFC1P51610 2035 aa16.75■□□□□ 0.27
IFT27-201ENST00000340630 PRRC2AP48634 2157 aaKnown RBP16.75■□□□□ 0.27
IFT27-201ENST00000340630 A8MVJ9 347 aa16.74■□□□□ 0.27
IFT27-201ENST00000340630 PRKNO60260 465 aaPredicted RBP16.74■□□□□ 0.27
IFT27-201ENST00000340630 GUCA1CO95843 209 aa16.74■□□□□ 0.27
IFT27-201ENST00000340630 SMIM10L1P0DMW3 83 aa16.74■□□□□ 0.27
IFT27-201ENST00000340630 PPP2R1BP30154 601 aa16.74■□□□□ 0.27
IFT27-201ENST00000340630 FOLH1Q04609 750 aa16.74■□□□□ 0.27
IFT27-201ENST00000340630 RBBP5Q15291 538 aaKnown RBP16.74■□□□□ 0.27
IFT27-201ENST00000340630 RBM20Q5T481 1227 aaKnown RBP16.74■□□□□ 0.27
IFT27-201ENST00000340630 HECTD2Q5U5R9 776 aa16.74■□□□□ 0.27
IFT27-201ENST00000340630 IL20RBQ6UXL0 311 aa16.74■□□□□ 0.27
IFT27-201ENST00000340630 TGIF2LYQ8IUE0 185 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms