RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 DPY19L1Q2PZI1 675 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 UNC5DQ6UXZ4 953 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 VN1R5Q7Z5H4 357 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 GPR141Q7Z602 305 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 SLC9B2Q86UD5 537 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 TP53I13Q8NBR0 393 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 KAT2AQ92830 837 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 UBE2FQ969M7 185 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 ZCCHC3Q9NUD5 404 aaKnown RBP9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 C2orf42Q9NWW7 574 aa9.71□□□□□ -0.86
RBFOX1-202ENST00000340209 SOBPA7XYQ1 873 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 UGDHO60701 494 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 SDC3O75056 442 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 TPP2P29144 1249 aaPredicted RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 EPHA2P29317 976 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 CDK9P50750 372 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 ALDH3A2P51648 485 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 LASP1Q14847 261 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 RPE65Q16518 533 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 DEFB134Q4QY38 66 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 R3HCC1LQ7Z5L2 792 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 NUDT13Q86X67 352 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 METTL27Q8N6F8 245 aaPredicted RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 ZNF614Q8N883 585 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 ZFP28Q8NHY6 868 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 CXorf36Q9H7Y0 433 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 KRT84Q9NSB2 600 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 IFT80Q9P2H3 777 aaPredicted RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 OR6C74A6NCV1 312 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 CCNDBP1O95273 360 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 CXCR2P25025 360 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 BCL6P41182 706 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 TRPC1P48995 793 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 NUDT6P53370 316 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 OR2T5Q6IEZ7 315 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 Q6ZSR6 202 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 CARM1Q86X55 608 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 PTOV1Q86YD1 416 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 NLGN4XQ8N0W4 816 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 OR2T29Q8NH02 315 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 HCAR2Q8TDS4 363 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 RELTQ969Z4 430 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 COX14Q96I36 57 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 QRSL1Q9H0R6 528 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 LMAN2LQ9H0V9 348 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 TAS2R9Q9NYW1 312 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 RPS6KA6Q9UK32 745 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 C17orf113A0A1B0GUU1 675 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 BCKDKO14874 412 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 CDC123O75794 336 aaPredicted RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 VIPP01282 170 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 FURINP09958 794 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 CDK6Q00534 326 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 SLAMF1Q13291 335 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 C18orf63Q68DL7 685 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 METTL2BQ6P1Q9 378 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 PAGE2Q7Z2X7 111 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 FAM46DQ8NEK8 389 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 FAM3CQ92520 227 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 BRF2Q9HAW0 419 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 FANCEQ9HB96 536 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 THUMPD1Q9NXG2 353 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 TAAR2Q9P1P5 351 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 NFKBIL1Q9UBC1 381 aaPredicted RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 ACSL5Q9ULC5 683 aa9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 EXO1Q9UQ84 846 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-202ENST00000340209 TMX2-CTNND1H3BSU7 103 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 NOL3O60936 208 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 NR2F1P10589 423 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 CSNK1G2P78368 415 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 HTR4Q13639 388 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 SMN1Q16637 294 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 DEPDC1Q5TB30 811 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 NDUFAF5Q5TEU4 345 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 KCTD8Q6ZWB6 473 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 KLHDC8AQ8IYD2 350 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 SHISA5Q8N114 240 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 OR13H1Q8NG92 308 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 TOE1Q96GM8 510 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 MAGEB10Q96LZ2 347 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 ZNF282Q9UDV7 671 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 CDC14AQ9UNH5 594 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 GMPPBQ9Y5P6 360 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 LRRC72A6NJI9 287 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 H3BNH8 94 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 DLGAP1O14490 977 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 FRS3O43559 492 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 OR12D1P0DN82 309 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 IL1RNP18510 177 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 PTPN6P29350 595 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 LTBRP36941 435 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 BUD31P41223 144 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 RAD23AP54725 363 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 ILF3Q12906 894 aaKnown RBP eCLIP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 MPEG1Q2M385 716 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 GPAT3Q53EU6 434 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 SNAP47Q5SQN1 464 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 INTS11Q5TA45 600 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 TRIM40Q6P9F5 258 aa9.69□□□□□ -0.86
RBFOX1-202ENST00000340209 TMEM107Q6UX40 140 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms