RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MYO15AQ9UKN7 3530 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 ACOX3O15254 700 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 CLOCKO15516 846 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 PRAMEF10O60809 474 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 ZNF682O95780 498 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 WNT1P04628 370 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 ETFAP13804 333 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 UGT2B7P16662 529 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 RGS19P49795 217 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 CPZQ66K79 652 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 TMEM214Q6NUQ4 689 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 TMEM154Q6P9G4 183 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 PAQR7Q86WK9 346 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 CHST8Q9H2A9 424 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 NTN4Q9HB63 628 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 UBAP1Q9NZ09 502 aa21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 APOBEC3BQ9UH17 382 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-203ENST00000339162 A0A0A6YYD5 115 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 GLOD5A6NK44 160 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 MAP3K13O43283 966 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 JUNDP17535 347 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 AQP1P29972 269 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 AHRP35869 848 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 MVDP53602 400 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 SNRPNP63162 240 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 PARGQ86W56 976 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 MFSD9Q8NBP5 474 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 KCT2Q8NC54 265 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 FAM46DQ8NEK8 389 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 NR1H4Q96RI1 486 aaPredicted RBP21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 MIR1-1HGQ9H1L0 117 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 MAP4K5Q9Y4K4 846 aa21.33■■□□□ 1.01
PDLIM2-203ENST00000339162 LYNP07948 512 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 ZNF23P17027 643 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 LRRC74AQ0VAA2 488 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 SLC5A12Q1EHB4 618 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 ABHD17CQ6PCB6 329 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 TBC1D19Q8N5T2 526 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 OR52E4Q8NGH9 312 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 SLC22A18Q96BI1 424 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 SHDQ96IW2 340 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 ACTR10Q9NZ32 417 aa21.33■■□□□ 1
PDLIM2-203ENST00000339162 EI24O14681 340 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 DENRO43583 198 aaKnown RBP21.32■■□□□ 1
PDLIM2-203ENST00000339162 CHI3L1P36222 383 aaPredicted RBP21.32■■□□□ 1
PDLIM2-203ENST00000339162 IST1P53990 364 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 PPP1R8Q12972 351 aaKnown RBP21.32■■□□□ 1
PDLIM2-203ENST00000339162 KIR2DS3Q14952 304 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 ADPRMQ3LIE5 342 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 TMEM35AQ53FP2 167 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 TBPL2Q6SJ96 375 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 VN1R4Q7Z5H5 301 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 DEFB123Q8N688 67 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 LRRC61Q9BV99 259 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 SARGQ9BW04 601 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 CXorf36Q9H7Y0 433 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 TBC1D17Q9HA65 648 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 PRDM7Q9NQW5 492 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 MAGED1Q9Y5V3 778 aaPredicted RBP21.32■■□□□ 1
PDLIM2-203ENST00000339162 SDK1Q7Z5N4 2213 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 MAGEA13PA6NCF6 341 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 METTL12A8MUP2 240 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 B4DGG1 531 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 FAM58BPP0C7Q3 252 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 PVRP15151 417 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 UBE2IP63279 158 aaKnown RBP21.32■■□□□ 1
PDLIM2-203ENST00000339162 SLAMF1Q13291 335 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 INTS11Q5TA45 600 aaKnown RBP21.32■■□□□ 1
PDLIM2-203ENST00000339162 NDUFAF5Q5TEU4 345 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 GPR153Q6NV75 609 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 FBXO42Q6P3S6 717 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 RNF130Q86XS8 419 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 ABCA7Q8IZY2 2146 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 TRIML2Q8N7C3 387 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 BDH2Q9BUT1 245 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 C9orf16Q9BUW7 83 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 DLGAP2Q9P1A6 1054 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 ADAM29Q9UKF5 820 aa21.32■■□□□ 1
PDLIM2-203ENST00000339162 FAF1Q9UNN5 650 aaPredicted RBP21.32■■□□□ 1
PDLIM2-203ENST00000339162 A0A0J9YVX5 310 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 UPK1AO00322 258 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 CTSVO60911 334 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 HIST1H1TP22492 207 aaPredicted RBP21.31■■□□□ 1
PDLIM2-203ENST00000339162 CERS1P27544 350 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 KDELR2P33947 212 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 MANFP55145 182 aaKnown RBP21.31■■□□□ 1
PDLIM2-203ENST00000339162 RPL6Q02878 288 aaKnown RBP21.31■■□□□ 1
PDLIM2-203ENST00000339162 ZP2Q05996 745 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 HSPB3Q12988 150 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 ACOT4Q8N9L9 421 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 OR2L5Q8NG80 312 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 PYURFQ96I23 114 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 Q9H521 79 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 POT1Q9NUX5 634 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 FBXW2Q9UKT8 454 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 PDPK1O15530 556 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 CST1P01037 141 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 PPIBP23284 216 aaKnown RBP21.31■■□□□ 1
PDLIM2-203ENST00000339162 LSSP48449 732 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 HSPA13P48723 471 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms