RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 AHSPQ9NZD4 102 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 DLGAP4Q9Y2H0 992 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.55■□□□□ 0.24
CHGA-202ENST00000334654 AVPR1BP47901 424 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 OLR1P78380 273 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 MAT1AQ00266 395 aaKnown RBP16.55■□□□□ 0.24
CHGA-202ENST00000334654 ABHD18Q0P651 414 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 DSG2Q14126 1118 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 NKAIN1Q4KMZ8 207 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 NOXRED1Q6NXP6 359 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 FAM199XQ6PEV8 388 aaPredicted RBP16.55■□□□□ 0.24
CHGA-202ENST00000334654 NUDT13Q86X67 352 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 ACTRT2Q8TDY3 377 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 TRIM55Q9BYV6 548 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 ROGDIQ9GZN7 287 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 ZNF304Q9HCX3 659 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 MCM8Q9UJA3 840 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 DCTN4Q9UJW0 460 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 CDC14AQ9UNH5 594 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 ASB4Q9Y574 426 aa16.55■□□□□ 0.24
CHGA-202ENST00000334654 CHST10O43529 356 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 DIAPH2O60879 1101 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 VPS4BO75351 444 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 TIA1P31483 386 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHGA-202ENST00000334654 HNRNPH2P55795 449 aaKnown RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 RPL38P63173 70 aaKnown RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 DCDP81605 110 aaKnown RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 SLAMF1Q13291 335 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 MAP7Q14244 749 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 SMU1Q2TAY7 513 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 LSM12Q3MHD2 195 aaKnown RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 ATP6AP1LQ52LC2 224 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 OGFOD2Q6N063 350 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 NIPAL1Q6NVV3 410 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 C6orf15Q6UXA7 325 aaPredicted RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 RIPOR1Q6ZS17 1223 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 DTX1Q86Y01 620 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 CA13Q8N1Q1 262 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHGA-202ENST00000334654 STON2Q8WXE9 905 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 NXPE2Q96DL1 559 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 MAPKAP1Q9BPZ7 522 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 NPLQ9BXD5 320 aaPredicted RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 CLK4Q9HAZ1 481 aaKnown RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 DAPP1Q9UN19 280 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 MAP4K5Q9Y4K4 846 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 POLR3HQ9Y535 204 aaPredicted RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 AK5Q9Y6K8 562 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 A0A088AWK7 358 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 B3GALT2O43825 422 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 PCDH7O60245 1069 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 CNOT3O75175 753 aaKnown RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 ALDOCP09972 364 aaKnown RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 LBPP18428 481 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 ZNF10P21506 573 aaPredicted RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 TACR1P25103 407 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 LIM2P55344 173 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 SHC2P98077 582 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 EMX2Q04743 252 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 SF3A3Q12874 501 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHGA-202ENST00000334654 SLC9A5Q14940 896 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 CCNYL2Q5T2Q4 361 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 PAGE2Q7Z2X7 111 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 TMEM151BQ8IW70 566 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 TM4SF18Q96CE8 201 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 DPH2Q9BQC3 489 aaPredicted RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 SIKE1Q9BRV8 207 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 EBPLQ9BY08 206 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 CHST8Q9H2A9 424 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 COPS7BQ9H9Q2 264 aaPredicted RBP16.54■□□□□ 0.24
CHGA-202ENST00000334654 HCN3Q9P1Z3 774 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 KLHL14Q9P2G3 628 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 TMED5Q9Y3A6 229 aa16.54■□□□□ 0.24
CHGA-202ENST00000334654 FREM2Q5SZK8 3169 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 IGLV3-12A0A075B6K2 115 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 CYR61O00622 381 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 KLK3P07288 261 aaPredicted RBP16.53■□□□□ 0.24
CHGA-202ENST00000334654 FAM58BPP0C7Q3 252 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 TROVE2P10155 538 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHGA-202ENST00000334654 BCKDHAP12694 445 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 ACPPP15309 386 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 SDC1P18827 310 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 CD82P27701 267 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 ERVK-8P63133 956 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 TMEM198Q66K66 360 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 MRPL14Q6P1L8 145 aaKnown RBP16.53■□□□□ 0.24
CHGA-202ENST00000334654 FAM198BQ6UWH4 519 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 OVCH1Q7RTY7 1134 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 CLNKQ7Z7G1 428 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 FNDC5Q8NAU1 212 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 OR51Q1Q8NH59 317 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 CEP70Q8NHQ1 597 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 COL26A1Q96A83 441 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 EGLN2Q96KS0 407 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 CCDC28BQ9BUN5 200 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 C1orf50Q9BV19 199 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 TMEM120AQ9BXJ8 343 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 EPN3Q9H201 632 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 LYRM4Q9HD34 91 aa16.53■□□□□ 0.24
CHGA-202ENST00000334654 THSD1Q9NS62 852 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms