RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PCDHGA3Q9Y5H0 932 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 PSMD11O00231 422 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 KIAA0513O60268 411 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 LEFTY1O75610 366 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 CYP7B1O75881 506 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 KLHL18O94889 574 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 TGM4P49221 684 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 C2orf80Q0P641 193 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 STARD3Q14849 445 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 DUSP7Q16829 419 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ARSIQ5FYB1 569 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 MPP7Q5T2T1 576 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 GCNT6Q5T4J0 391 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 TMEM215Q68D42 235 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 BCDIN3DQ7Z5W3 292 aaKnown RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 METTL3Q86U44 580 aaKnown RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 AMER2Q8N7J2 671 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF513Q8N8E2 541 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 FCGR1BQ92637 280 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 EMILIN2Q9BXX0 1053 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 RSPO3Q9BXY4 272 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 C11orf16Q9NQ32 467 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 PLCXD1Q9NUJ7 323 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 HCFC1R1Q9NWW0 138 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 MYO10Q9HD67 2058 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 PTPRSQ13332 1948 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 H3BM21 787 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 UGDHO60701 494 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 MRPS14O60783 128 aaKnown RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 SOX14O95416 240 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 RECKO95980 971 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 GASTP01350 101 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 CKMT1AP12532 417 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 HNF4AP41235 474 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ASMTP46597 345 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 TAS2R50P59544 299 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 TBPL1P62380 186 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 SLBPQ14493 270 aaKnown RBP eCLIP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 LRIT3Q3SXY7 679 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ANXA8L1Q5VT79 327 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 CCBE1Q6UXH8 406 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 SLCO4C1Q6ZQN7 724 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 GDPD3Q7L5L3 318 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 RASGRP3Q8IV61 690 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 AQP11Q8NBQ7 271 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF480Q8WV37 535 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 COL21A1Q96P44 957 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 C1GALT1Q9NS00 363 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 GULP1Q9UBP9 304 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF282Q9UDV7 671 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 SLC25A13Q9UJS0 675 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 POFUT2Q9Y2G5 429 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 KLK1P06870 262 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 S100A5P33763 92 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CNR2P34972 360 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-201ENST00000333371 PIK3CBP42338 1070 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CDK6Q00534 326 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CDC20Q12834 499 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 TEAD4Q15561 434 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 TMEM220Q6QAJ8 160 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 AKAP14Q86UN6 197 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 LACC1Q8IV20 430 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-201ENST00000333371 VANGL1Q8TAA9 524 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-201ENST00000333371 ATL1Q8WXF7 558 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 STARD8Q92502 1023 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CPEB1Q9BZB8 566 aaKnown RBP11.78□□□□□ -0.52
VPS33B-201ENST00000333371 LINC00597Q9H2U6 94 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 REEP4Q9H6H4 257 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 SP140LQ9H930 580 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 NUMA1Q14980 2115 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 A6NL46 340 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 RNASET2O00584 256 aaKnown RBP11.78□□□□□ -0.52
VPS33B-201ENST00000333371 KIAA0355O15063 1070 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 KMOO15229 486 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 ZW10O43264 779 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CTSLP07711 333 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 ANXA8P13928 327 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CCR2P41597 374 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 GJA8P48165 433 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 METAP1P53582 386 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 UGT2B15P54855 530 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 C21orf58P58505 322 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF763Q0D2J5 394 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 GRIN2CQ14957 1233 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF181Q2M3W8 571 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPS33B-201ENST00000333371 SDHCQ99643 169 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-201ENST00000333371 MGLLQ99685 303 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 BRF2Q9HAW0 419 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CPNE5Q9HCH3 593 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 CLEC2DQ9UHP7 191 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 PCDHGB6Q9Y5F9 930 aa11.78□□□□□ -0.52
VPS33B-201ENST00000333371 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.53
VPS33B-201ENST00000333371 TRBC2A0A5B9 178 aa11.77□□□□□ -0.53
VPS33B-201ENST00000333371 TAF4O00268 1085 aa11.77□□□□□ -0.53
VPS33B-201ENST00000333371 WWP2O00308 870 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms