RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 KCNJ8Q15842 424 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 YIF1BQ5BJH7 314 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 LINGO4Q6UY18 593 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 PXKQ7Z7A4 578 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 NANOGP1Q8N7R0 232 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 DENND6BQ8NEG7 585 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 NEURL3Q96EH8 262 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 YME1L1Q96TA2 773 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 GAS2L1Q99501 681 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 SLC46A2Q9BY10 475 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 ABCG4Q9H172 646 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 NT5DC2Q9H857 520 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 MUTYHQ9UIF7 546 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 INSL5Q9Y5Q6 135 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 HMGN4O00479 90 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 LALBAP00709 142 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 CPEP16870 476 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF30P17039 623 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 HOXD12P35452 270 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 RGS6P49758 472 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 TCF15Q12870 199 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 TNK1Q13470 666 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 CAMK2BQ13554 666 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 INPP5AQ14642 412 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 DUSP7Q16829 419 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 PLEKHG6Q3KR16 790 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 ATP6AP1LQ52LC2 224 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 CEP78Q5JTW2 689 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 C6orf163Q5TEZ5 329 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 RNF219Q5W0B1 726 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 PNCKQ6P2M8 343 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 C12orf40Q86WS4 652 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 HIPK1Q86Z02 1210 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 NAGSQ8N159 534 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 OR4M2Q8NGB6 313 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 GIPC3Q8TF64 312 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 GLMNQ92990 594 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 TUBGCP3Q96CW5 907 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 LGALS12Q96DT0 336 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 MYADMQ96S97 322 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 HBEGFQ99075 208 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 MYOCQ99972 504 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 DPH2Q9BQC3 489 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 PPIL3Q9H2H8 161 aaKnown RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 C3orf14Q9HBI5 128 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 LRTM1Q9HBL6 345 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 FGF20Q9NP95 211 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 TMEM74BQ9NUR3 256 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 ABI2Q9NYB9 513 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 SLC27A6Q9Y2P4 619 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 RELNP78509 3460 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 A6NCN8 305 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 KDM4EB2RXH2 506 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 H7C4K7 107 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 STK25O00506 426 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 AP3D1O14617 1153 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 CLPSP04118 112 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 ZGLP1P0C6A0 271 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 ITGB6P18564 788 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 FGF9P31371 208 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 VAC14Q08AM6 782 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 CAMK2GQ13555 558 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 FAM83HQ6ZRV2 1179 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-201ENST00000315544 GALNT10Q86SR1 603 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 DENND1CQ8IV53 801 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 LINC01555Q8NAE3 123 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 PRSS33Q8NF86 280 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 BLOC1S5Q8TDH9 187 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 EXOC2Q96KP1 924 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 OR5M11Q96RB7 305 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 GFI1Q99684 422 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 EXD2Q9NVH0 621 aa7.45□□□□□ -1.22
CNOT4-201ENST00000315544 HAT1O14929 419 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ALBP02768 609 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 TEAD1P28347 426 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ATP5C1P36542 298 aaKnown RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 RHAGQ02094 409 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 C2orf80Q0P641 193 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 PLD1Q13393 1074 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ILKQ13418 452 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 TOP3AQ13472 1001 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 MLF2Q15773 248 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF181Q2M3W8 571 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 KIAA1211LQ6NV74 962 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ERICH5Q6P6B1 374 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 SCN4BQ8IWT1 228 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 BBS7Q8IWZ6 715 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 RBFAQ8N0V3 343 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 DUSP18Q8NEJ0 188 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 OR8D4Q8NGM9 314 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 SLC38A4Q969I6 547 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ZC3H10Q96K80 434 aaKnown RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 NODALQ96S42 347 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 DOHHQ9BU89 302 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 TMEM121BQ9BXQ6 578 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 AASDHPPTQ9NRN7 309 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF221Q9UK13 617 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 NPTNQ9Y639 398 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 PCNX3Q9H6A9 2034 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 TMEM247A6NEH6 219 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms