RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PPP2R2BQ00005 443 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 MYBPC3Q14896 1274 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 HEPACAMQ14CZ8 416 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 ZIC1Q15915 447 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 KIAA1614Q5VZ46 1190 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 USP51Q70EK9 711 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 AMIGO1Q86WK6 493 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 RNF130Q86XS8 419 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 METTL25Q8N6Q8 603 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 TSPAN14Q8NG11 270 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 TTLQ8NG68 377 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 LCN9Q8WX39 176 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 C17orf62Q9BQA9 187 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 DDX31Q9H8H2 851 aaKnown RBP17.49■□□□□ 0.39
CCDC43-201ENST00000315286 C1GALT1Q9NS00 363 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 TEX10Q9NXF1 929 aaPredicted RBP17.49■□□□□ 0.39
CCDC43-201ENST00000315286 MAP4K5Q9Y4K4 846 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 ISM1B1AKI9 464 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 H0YAE9 185 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 hCG_2039718K7EN88 272 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 TNFRSF10CO14798 259 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 FKBP9O95302 570 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 PAX7P23759 505 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 AKT2P31751 481 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 SOAT1P35610 550 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 CHI3L1P36222 383 aaPredicted RBP17.49■□□□□ 0.39
CCDC43-201ENST00000315286 SRP54P61011 504 aaKnown RBP17.49■□□□□ 0.39
CCDC43-201ENST00000315286 VLDLRP98155 873 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 ALG11Q2TAA5 492 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 Q6ZSR6 202 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 UCN3Q969E3 161 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 TPD52L3Q96J77 140 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 CXorf36Q9H7Y0 433 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 CLK4Q9HAZ1 481 aaKnown RBP17.49■□□□□ 0.39
CCDC43-201ENST00000315286 ADAM29Q9UKF5 820 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 PCOLCE2Q9UKZ9 415 aa17.49■□□□□ 0.39
CCDC43-201ENST00000315286 KDM1AO60341 852 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 TBX19O60806 448 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 DIRAS1O95057 198 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 CHRM5P08912 532 aaPredicted RBP17.48■□□□□ 0.39
CCDC43-201ENST00000315286 SLC19A1P41440 591 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 HYAL2Q12891 473 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 TEAD4Q15561 434 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 TTC33Q6PID6 262 aaPredicted RBP17.48■□□□□ 0.39
CCDC43-201ENST00000315286 PATL1Q86TB9 770 aaKnown RBP17.48■□□□□ 0.39
CCDC43-201ENST00000315286 ZNF786Q8N393 782 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 GRIP2Q9C0E4 1043 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 C6orf106Q9H6K1 298 aaPredicted RBP17.48■□□□□ 0.39
CCDC43-201ENST00000315286 SYNPO2LQ9H987 977 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 USE1Q9NZ43 259 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 OR6C2Q9NZP2 312 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 USP36Q9P275 1121 aaKnown RBP17.48■□□□□ 0.39
CCDC43-201ENST00000315286 SNX8Q9Y5X2 465 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 DGKBQ9Y6T7 804 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 A0A0A6YYD5 115 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 TMEM229AB2RXF0 380 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 FABP3P05413 133 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 NDUFS1P28331 727 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 CMPK1P30085 196 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 SHMT2P34897 504 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 YPEL5P62699 121 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 PLCL1Q15111 1095 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 GCNT6Q5T4J0 391 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 OR2T5Q6IEZ7 315 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 TRIM40Q6P9F5 258 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 ZNF793Q6ZN11 406 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 OR2T29Q8NH02 315 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 RBM4BQ9BQ04 359 aaKnown RBP17.48■□□□□ 0.39
CCDC43-201ENST00000315286 RBM4Q9BWF3 364 aaKnown RBP17.48■□□□□ 0.39
CCDC43-201ENST00000315286 ASPSCR1Q9BZE9 553 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 TOR3AQ9H497 397 aa17.48■□□□□ 0.39
CCDC43-201ENST00000315286 KNL1Q8NG31 2342 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 A6NCN8 305 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 C10orf142B7Z368 130 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 C4orf51C9J302 202 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 OR6B1O95007 311 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 IGHV4-34P06331 123 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 UQCRC2P22695 453 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 SSR2P43308 183 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 PRIM2P49643 509 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 MANFP55145 182 aaKnown RBP17.47■□□□□ 0.39
CCDC43-201ENST00000315286 FADDQ13158 208 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 NADK2Q4G0N4 442 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 TMEM35AQ53FP2 167 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 ZNF425Q6IV72 752 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 NRROSQ86YC3 692 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 OR5P2Q8WZ92 322 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 EXOSC8Q96B26 276 aaKnown RBP17.47■□□□□ 0.39
CCDC43-201ENST00000315286 EPS8L2Q9H6S3 715 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 TM9SF3Q9HD45 589 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 KLF15Q9UIH9 416 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 HS3ST3A1Q9Y663 406 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 AP1M2Q9Y6Q5 423 aa17.47■□□□□ 0.39
CCDC43-201ENST00000315286 BTN3A3O00478 584 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 PDPK1O15530 556 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SUV39H1O43463 412 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 KRT75O95678 551 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 AHRP35869 848 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 CDH15P55291 814 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms