RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FAM86C1Q9NVL1 165 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 GPR83Q9NYM4 423 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 UBQLN2Q9UHD9 624 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 LGALS13Q9UHV8 139 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 ZNF670-ZNF695F2Z2N8 137 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 PDYNP01213 254 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 FASLGP48023 281 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 FXYD4P59646 89 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 ECH1Q13011 328 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 RNF111Q6ZNA4 994 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 TMIGD2Q96BF3 282 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 ASB9Q96DX5 294 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 ZNF223Q9UK11 482 aaPredicted RBP12.21□□□□□ -0.46
USP38-201ENST00000307017 PTCH2Q9Y6C5 1203 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 MROH2AA6NES4 1674 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 FAM227AF5H4B4 570 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 RAB4AP20338 218 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 CDK10Q15131 360 aa12.21□□□□□ -0.46
USP38-201ENST00000307017 C2orf74A8MZ97 194 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 MITFO75030 526 aaPredicted RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 NCR1O76036 304 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 SMSP52788 366 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 FGL2Q14314 439 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 CLEC20AQ6ZU45 233 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 CEACAM19Q7Z692 300 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 TESCQ96BS2 214 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 ZBTB26Q9HCK0 441 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 CNTN5O94779 1100 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 POP4O95707 220 aaKnown RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 C8GP07360 202 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 DLDP09622 509 aaKnown RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 FBXO45P0C2W1 286 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 PTGR1Q14914 329 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 ABHD13Q7L211 337 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 TECPR1Q7Z6L1 1165 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 PCDHGA7Q9Y5G6 932 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 PRDX6P30041 224 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 CDK6Q00534 326 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 BCL2L15Q5TBC7 163 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 LRFN4Q6PJG9 635 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 CMTM8Q8IZV2 173 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 CCDC107Q8WV48 283 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 RASSF5Q8WWW0 418 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 ENY2Q9NPA8 101 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 RABL2AQ9UBK7 228 aaPredicted RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 RUVBL1Q9Y265 456 aaKnown RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 BRINP1O60477 761 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 C8AP07357 584 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 GNAZP19086 355 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 ERVK-25P63136 954 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 ZNF792Q3KQV3 632 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 FAM46AQ96IP4 442 aaKnown RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 IL17FQ96PD4 163 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 SMIM3Q9BZL3 60 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 F5H0A9 414 aaPredicted RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 DFNA5O60443 496 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 B4GALT4O60513 344 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 ATP1B2P14415 290 aaPredicted RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 GDPD4Q6W3E5 623 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 TICAM1Q8IUC6 712 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 Q8N402 240 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 PHOX2BQ99453 314 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 NPLQ9BXD5 320 aaPredicted RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 TINAGL1Q9GZM7 467 aaPredicted RBP12.2□□□□□ -0.46
USP38-201ENST00000307017 IFT52Q9Y366 437 aa12.2□□□□□ -0.46
USP38-201ENST00000307017 H7BY64 318 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 BCKDHAP12694 445 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 SLC2A5P22732 501 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 SSTR2P30874 369 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 GDI1P31150 447 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 NSG1P42857 185 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 EEFSECP57772 596 aaKnown RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 SULT2A1Q06520 285 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 NIPAL1Q6NVV3 410 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 PLA2G15Q8NCC3 412 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 TRMT10AQ8TBZ6 339 aaKnown RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 S100A16Q96FQ6 103 aaKnown RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 PRAP1Q96NZ9 151 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 TRMOQ9BU70 441 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 BMP8BP34820 402 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 VSX2P58304 361 aaPredicted RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 BDH1Q02338 343 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 PRRT3Q5FWE3 981 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 ARHGAP40Q5TG30 622 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 BMP8AQ7Z5Y6 402 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 TXNDC5Q8NBS9 432 aaKnown RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 ANKHQ9HCJ1 492 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 NUAK1O60285 661 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 ZNF35P13682 527 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 HERV-K104P61576 105 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 TEAD4Q15561 434 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 COL28A1Q2UY09 1125 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 EPGNQ6UW88 154 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 GEMIN6Q8WXD5 167 aaKnown RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 RGMAQ96B86 450 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 OR8D2Q9GZM6 311 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 HS3ST4Q9Y661 456 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 CTHP32929 405 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 GABRA3P34903 492 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms