RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SCO1O75880 301 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 TSPAN12O95859 305 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 F2P00734 622 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 APEX1P27695 318 aaKnown RBP12.53□□□□□ -0.4
TRIM35-201ENST00000305364 SPAM1P38567 509 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 VEZF1Q14119 521 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 ATP13A5Q4VNC0 1218 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 GHDCQ8N2G8 530 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 ARPC5LQ9BPX5 153 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 TMPRSS11EQ9UL52 423 aa12.53□□□□□ -0.4
TRIM35-201ENST00000305364 ZNF780AO75290 641 aaPredicted RBP12.52□□□□□ -0.4
TRIM35-201ENST00000305364 PEX11BO96011 259 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 RPS7P62081 194 aaKnown RBP12.52□□□□□ -0.4
TRIM35-201ENST00000305364 FXNQ16595 210 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 ZNF792Q3KQV3 632 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 ESCO2Q56NI9 601 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 TMPRSS11BQ86T26 416 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 OR52E4Q8NGH9 312 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 PIP5K1AQ99755 562 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 MAN2B2Q9Y2E5 1009 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 KCNE2Q9Y6J6 123 aa12.52□□□□□ -0.4
TRIM35-201ENST00000305364 H3BQ06 376 aaPredicted RBP12.52□□□□□ -0.41
TRIM35-201ENST00000305364 TAPBPO15533 448 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 C4BPBP20851 252 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 NSG1P42857 185 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 CLCN7P51798 805 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 RGNQ15493 299 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 CNIH2Q6PI25 160 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 NTMT1Q9BV86 223 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 PAK6Q9NQU5 681 aaPredicted RBP12.52□□□□□ -0.41
TRIM35-201ENST00000305364 TAS2R7Q9NYW3 318 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 SEC14L3Q9UDX4 400 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 CLEC2DQ9UHP7 191 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 TBC1D24Q9ULP9 559 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 PPT2Q9UMR5 302 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 RABL2BQ9UNT1 228 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 DYRK1BQ9Y463 629 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 SDK1Q7Z5N4 2213 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 B4DXG7 233 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 PCDH7O60245 1069 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 C6orf47O95873 294 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 IFNA7P01567 189 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 PKLRP30613 574 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 CORO1AP31146 461 aaKnown RBP12.52□□□□□ -0.41
TRIM35-201ENST00000305364 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 LEXMQ3ZCV2 418 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 LRIF1Q5T3J3 769 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 BHLHA9Q7RTU4 235 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 LRRC70Q7Z2Q7 622 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 ADGRD2Q7Z7M1 963 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 MGME1Q9BQP7 344 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 HDHD5Q9BXW7 423 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 BEX1Q9HBH7 125 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 TRPM5Q9NZQ8 1165 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 MGAT4AQ9UM21 535 aa12.52□□□□□ -0.41
TRIM35-201ENST00000305364 PRRC2BQ5JSZ5 2229 aaKnown RBP12.52□□□□□ -0.41
TRIM35-201ENST00000305364 MTX2O75431 263 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 WISP3O95389 354 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 IL1RNP18510 177 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PAICSP22234 425 aaKnown RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 MLLT3P42568 568 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 MRPL19P49406 292 aaKnown RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 NFATC2Q13469 925 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 FRMPD2BQ6IN97 320 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TRIM46Q7Z4K8 759 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 ADGRG2Q8IZP9 1017 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 APH1BQ8WW43 257 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CATP04040 527 aaKnown RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CCL23P55773 120 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PTSQ03393 145 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 POU4F3Q15319 338 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 FAM20CQ8IXL6 584 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 SLC38A6Q8IZM9 456 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TP53I13Q8NBR0 393 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 GATAD2BQ8WXI9 593 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TESCQ96BS2 214 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 SLC38A2Q96QD8 506 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 DHRS9Q9BPW9 319 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 MED16Q9Y2X0 877 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 A0A1B0GVM2 712 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TOXO94900 526 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 IGLV3-25P01717 112 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PRKAG1P54619 331 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PSPHP78330 225 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 IHHQ14623 411 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 SUZ12Q15022 739 aaKnown RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 FLYWCH1Q4VC44 716 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 RASSF6Q6ZTQ3 369 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 FAM92BQ6ZTR7 304 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CHMP1BQ7LBR1 199 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms