RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CLCA1A8K7I4 914 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 OXSR1O95747 527 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-201ENST00000304636 GADD45AP24522 165 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 DNASE1P24855 282 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 HNRNPFP52597 415 aaKnown RBP12.39□□□□□ -0.43
COL3A1-201ENST00000304636 NFATC2Q13469 925 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 SCGB2B2Q4G0G5 96 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 FAM124AQ86V42 546 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 CARM1Q86X55 608 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 BBS10Q8TAM1 723 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 NDNFQ8TB73 568 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 FCAMRQ8WWV6 532 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 NELL2Q99435 816 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 RETREG1Q9H6L5 497 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 TAC3Q9UHF0 121 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 MAGED1Q9Y5V3 778 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-201ENST00000304636 TRBV23OR9-2A0A075B6M9 112 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 A0A0U1RQF3 1178 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 CLCN7P51798 805 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 CDK5R2Q13319 367 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 KEAP1Q14145 624 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 SLC36A3Q495N2 470 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 FAM76BQ5HYJ3 339 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 TMEM125Q96AQ2 219 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 DUS2Q9NX74 493 aaKnown RBP12.39□□□□□ -0.43
COL3A1-201ENST00000304636 GNG8Q9UK08 70 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 ZNF451Q9Y4E5 1061 aa12.39□□□□□ -0.43
COL3A1-201ENST00000304636 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 EEF1E1O43324 174 aaKnown RBP12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GMFGO60234 142 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 UBXN7O94888 489 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 DBIP07108 87 aaKnown RBP12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GPR135Q8IZ08 494 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 DCAF4L2Q8NA75 395 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GPR83Q9NYM4 423 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GBAP04062 536 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 AHCYP23526 432 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 PDHA2P29803 388 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 AKT2P31751 481 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 RCAN2Q14206 197 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 LRRC32Q14392 662 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 RAB6CQ53S08 254 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 DPY19L3Q6ZPD9 716 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 SPARTQ8N0X7 666 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GDPD1Q8N9F7 314 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 STOML3Q8TAV4 291 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 THRSPQ92748 146 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 SLC22A18Q96BI1 424 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 RAB6CQ9H0N0 254 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 PCTPQ9UKL6 214 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 IL3P08700 152 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GTF2IRD2BQ6EKJ0 949 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 GTF2IRD2Q86UP8 949 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 OR14C36Q8NHC7 312 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 WFIKKN2Q8TEU8 576 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 CLCC1Q96S66 551 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 BEX1Q9HBH7 125 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 NOP16Q9Y3C1 178 aaKnown RBP12.38□□□□□ -0.43
COL3A1-201ENST00000304636 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
COL3A1-201ENST00000304636 RPP14O95059 124 aaKnown RBP12.38□□□□□ -0.43
COL3A1-201ENST00000304636 CSN2P05814 226 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 MPC1LP0DKB6 136 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 MAGEA11P43364 429 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 INHBCP55103 352 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 LRP8Q14114 963 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 CYP27C1Q4G0S4 372 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 PLPP4Q5VZY2 271 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 NUP54Q7Z3B4 507 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 ADGRG5Q8IZF4 528 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 COQ8AQ8NI60 647 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 FRS2Q8WU20 508 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 SLC30A3Q99726 388 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 TM9SF2Q99805 663 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 INTS6Q9UL03 887 aaKnown RBP12.38□□□□□ -0.43
COL3A1-201ENST00000304636 EMCNQ9ULC0 261 aa12.38□□□□□ -0.43
COL3A1-201ENST00000304636 PGAM2P15259 253 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 IL12BP29460 328 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 SLC6A6P31641 620 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 OR5P2Q8WZ92 322 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 MOAP1Q96BY2 351 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 TP63Q9H3D4 680 aaPredicted RBP12.37□□□□□ -0.43
COL3A1-201ENST00000304636 CDH7Q9ULB5 785 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 ZFR2Q9UPR6 939 aaKnown RBP12.37□□□□□ -0.43
COL3A1-201ENST00000304636 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL3A1-201ENST00000304636 OR7A10O76100 309 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 RASGRP1O95267 797 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 ILF3Q12906 894 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL3A1-201ENST00000304636 ABHD13Q7L211 337 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 OR51G2Q8NGK0 314 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 FEVQ99581 238 aa12.37□□□□□ -0.43
COL3A1-201ENST00000304636 GSTO2Q9H4Y5 243 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms