RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 ADAMTS16Q8TE57 1224 aa5.54□□□□□ -1.52
ZNF440-201ENST00000304060 ASB15Q8WXK1 588 aa5.54□□□□□ -1.52
ZNF440-201ENST00000304060 DNAJC1Q96KC8 554 aaKnown RBP5.54□□□□□ -1.52
ZNF440-201ENST00000304060 ART5Q96L15 291 aa5.54□□□□□ -1.52
ZNF440-201ENST00000304060 SIKE1Q9BRV8 207 aa5.54□□□□□ -1.52
ZNF440-201ENST00000304060 XKR8Q9H6D3 395 aa5.54□□□□□ -1.52
ZNF440-201ENST00000304060 NGBQ9NPG2 151 aa5.54□□□□□ -1.52
ZNF440-201ENST00000304060 ZGRF1Q86YA3 2104 aa5.54□□□□□ -1.52
ZNF440-201ENST00000304060 DSPP15924 2871 aaKnown RBP5.54□□□□□ -1.52
ZNF440-201ENST00000304060 TTC24A2A3L6 582 aaPredicted RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 RNF103O00237 685 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 CASC3O15234 703 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 TMCC2O75069 709 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 DNAJB6O75190 326 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 SLC25A12O75746 678 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 HEXAP06865 529 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 HMOX2P30519 316 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 MC4RP32245 332 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 PHBP35232 272 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ASCL1P50553 236 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 IST1P53990 364 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 EIF3EP60228 445 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 MAPRE2Q15555 327 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ANKDD1AQ495B1 522 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 HECTD2Q5U5R9 776 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 MRPL14Q6P1L8 145 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 KIRREL2Q6UWL6 708 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 UGT2A3Q6UWM9 527 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ADAMTSL2Q86TH1 951 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 DMRTC2Q8IXT2 367 aaPredicted RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 BTBD9Q96Q07 612 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 AIFM2Q9BRQ8 373 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 WDR41Q9HAD4 459 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 CNOT6Q9ULM6 557 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 CRYL1Q9Y2S2 319 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 HYOU1Q9Y4L1 999 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 FUCA1P04066 466 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 MAGP20916 626 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 PCSK6P29122 969 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 OR1D4P47884 311 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 MGAT5Q09328 741 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 NIPAL4Q0D2K0 466 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 CA9Q16790 459 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 FAM153CQ494X1 144 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ANKRD20A4Q4UJ75 823 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 HLA-DQA1Q5Y7H0 255 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 AFTPHQ6ULP2 937 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 RFLNAQ6ZTI6 216 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 OTOAQ7RTW8 1153 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ZZZ3Q8IYH5 903 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 FITM2Q8N6M3 262 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 PLPP7Q8NBV4 271 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 CATSPER1Q8NEC5 780 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 OR2L8Q8NGY9 312 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 NANOS1Q8WY41 292 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 RNF157Q96PX1 679 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 BARD1Q99728 777 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 DHRS9Q9BPW9 319 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 SIX2Q9NPC8 291 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 CCM2LQ9NUG4 571 aaPredicted RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 DCAF16Q9NXF7 216 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 NTNG1Q9Y2I2 539 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 DDX3YO15523 660 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 CDH16O75309 829 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 PROSCO94903 275 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 KRT6AP02538 564 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 KRT6BP04259 564 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 SP1P08047 785 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 T-ENOLP0DO92 83 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ACVR2AP27037 513 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 YBX1P67809 324 aaKnown RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ZBTB17Q13105 803 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 BBS9Q3SYG4 887 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 FLYWCH1Q4VC44 716 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 OPN5Q6U736 354 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 LRRC74BQ6ZQY2 392 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 SHISA6Q6ZSJ9 500 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 PDIK1LQ8N165 341 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 STYXQ8WUJ0 223 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 TMEM171Q8WVE6 324 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 FCRL5Q96RD9 977 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 FRMD8P1Q9BZ68 369 aaPredicted RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 LRRC40Q9H9A6 602 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 COPS7BQ9H9Q2 264 aaPredicted RBP5.53□□□□□ -1.52
ZNF440-201ENST00000304060 COPS7AQ9UBW8 275 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 TINAGQ9UJW2 476 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 SNX8Q9Y5X2 465 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ACTL7BQ9Y614 415 aa5.53□□□□□ -1.52
ZNF440-201ENST00000304060 ALDOAP04075 364 aaKnown RBP5.52□□□□□ -1.53
ZNF440-201ENST00000304060 ABCB1P08183 1280 aaPredicted RBP5.52□□□□□ -1.53
ZNF440-201ENST00000304060 KRT4P19013 534 aa5.52□□□□□ -1.53
ZNF440-201ENST00000304060 CD53P19397 219 aa5.52□□□□□ -1.53
ZNF440-201ENST00000304060 TTPAP49638 278 aa5.52□□□□□ -1.53
ZNF440-201ENST00000304060 ABRQ12979 859 aa5.52□□□□□ -1.53
ZNF440-201ENST00000304060 SIX1Q15475 284 aaPredicted RBP5.52□□□□□ -1.53
ZNF440-201ENST00000304060 PLAG1Q6DJT9 500 aa5.52□□□□□ -1.53
ZNF440-201ENST00000304060 PAPD4Q6PIY7 484 aaKnown RBP5.52□□□□□ -1.53
ZNF440-201ENST00000304060 SERPINA9Q86WD7 417 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms