RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 IL20RBQ6UXL0 311 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 DCAF4L2Q8NA75 395 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TTLQ8NG68 377 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 UFD1Q92890 307 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 PRAMEF33A0A0G2JMD5 474 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LRRC10BA6NIK2 292 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 PRAMEF10O60809 474 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 GNRHRP30968 328 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CPOXP36551 454 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 RPS9P46781 194 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 E2F2Q14209 437 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SLC35G1Q2M3R5 365 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SLC15A3Q8IY34 581 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CASTOR1Q8WTX7 329 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TSSK6Q9BXA6 273 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 C8orf33Q9H7E9 229 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ADRB3P13945 408 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 GDF1P27539 372 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 OR1D4P47884 311 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TBPL1P62380 186 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ADAM8P78325 824 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 NDUFA5Q16718 116 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LRRC37A5PQ49AS3 106 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MANEAQ5SRI9 462 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ABHD17BQ5VST6 288 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SERINC5Q86VE9 423 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF565Q8N9K5 539 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 POGLUT1Q8NBL1 392 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TRIM43Q96BQ3 446 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TEPSINQ96N21 525 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CASD1Q96PB1 797 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 APOOQ9BUR5 198 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 HAPLN2Q9GZV7 340 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 DNMT3AQ9Y6K1 912 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SLC9B1P1A6NJY1 282 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 AGPSO00116 658 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 PRPS2P11908 318 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 MAZP56270 477 aaKnown RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 PIGFQ07326 219 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 GRIN2CQ14957 1233 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 SDR16C5Q8N3Y7 309 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ERMAPQ96PL5 475 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 SLC5A7Q9GZV3 580 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 RPF2Q9H7B2 306 aaKnown RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CLK4Q9HAZ1 481 aaKnown RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF701Q9NV72 531 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CYTH4Q9UIA0 394 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 BBIP1A8MTZ0 92 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF888P0CJ79 500 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 POU3F4P49335 361 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF33BQ06732 778 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 MPP2Q14168 576 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 B3GNT6Q6ZMB0 384 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 IKBIPQ70UQ0 350 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 LRRTM3Q86VH5 581 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 RNF175Q8N4F7 328 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 RCBTB1Q8NDN9 531 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 SPRYD4Q8WW59 207 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 PIK3R3Q92569 461 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 KCNJ9Q92806 393 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CWH43Q9H720 699 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ENY2Q9NPA8 101 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 FANCFQ9NPI8 374 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 LRIT1Q9P2V4 623 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 SARDHQ9UL12 918 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 KRBA1A5PL33 1030 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 DUXAA6NLW8 204 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 TLR4O00206 839 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 MAP2K7O14733 419 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 AURKAO14965 403 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 TPPPO94811 219 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 IMPDH1P20839 514 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 SLC18A1P54219 525 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CDK6Q00534 326 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 DCDC5Q6ZRR9 648 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 DPY19L4Q7Z388 723 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CLEC1AQ8NC01 280 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 OR5B2Q96R09 309 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CITED4Q96RK1 184 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CRB3Q9BUF7 120 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 TAS2R9Q9NYW1 312 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF670-ZNF695F2Z2N8 137 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 H2BFMP0C1H6 154 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CTSAP10619 480 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 CYBAP13498 195 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 KCNE1P15382 129 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 MAP4K2Q12851 820 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 TGFBIQ15582 683 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 GPR33Q49SQ1 333 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF227Q86WZ6 799 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 IGDCC3Q8IVU1 814 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 NAT8LQ8N9F0 302 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 PNLDC1Q8NA58 520 aaKnown RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 PNPLA2Q96AD5 504 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF514Q96K75 400 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-201ENST00000303354 TMEM51Q9NW97 253 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 MRC1P22897 1456 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 PGRP06401 933 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 PSKH1P11801 424 aa7.5□□□□□ -1.21
SCN9A-201ENST00000303354 RPS3AP61247 264 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms