RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 GSTT2P0CG29 244 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 GSTT2BP0CG30 244 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 TGM4P49221 684 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 HNRNPFP52597 415 aaKnown RBP23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 KCNC3Q14003 757 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 ZDHHC20Q5W0Z9 365 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 OLIG3Q7RTU3 272 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 TRMT11Q7Z4G4 463 aaKnown RBP23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 RASGRP3Q8IV61 690 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 KIAA1958Q8N8K9 716 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 RAB8BQ92930 207 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 OR2AG1Q9H205 316 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 SIAEQ9HAT2 523 aa23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 EXOSC4Q9NPD3 245 aaKnown RBP23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 FAM32AQ9Y421 112 aaKnown RBP23.33■■□□□ 1.32
SPTSSA-201ENST00000298130 LINC00854A0A1B0GVQ3 168 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 ELFN1P0C7U0 828 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 CYP2A6P11509 494 aaPredicted RBP23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 S100A5P33763 92 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 HOXD12P35452 270 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 NR4A2P43354 598 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 NEK10Q6ZWH5 1172 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 TRAM1L1Q8N609 369 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 AMER2Q8N7J2 671 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 CELF2-AS1Q8N7Q2 184 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 OR52N2Q8NGI0 321 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 VANGL1Q8TAA9 524 aaPredicted RBP23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 VWCEQ96DN2 955 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 RSPO3Q9BXY4 272 aaPredicted RBP23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 RERGLQ9H628 205 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 PIPSLA2A3N6 862 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 SNPHO15079 494 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 ZW10O43264 779 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 C1orf105O95561 183 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 ANXA8P13928 327 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 TMEM53Q6P2H8 277 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 PTCHD4Q6ZW05 846 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 RBM45Q8IUH3 476 aaKnown RBP23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 METTL4Q8N3J2 472 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 CELF5Q8N6W0 485 aaKnown RBP23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 WDR36Q8NI36 951 aaKnown RBP23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 FCGR1BQ92637 280 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 FOPNLQ96NB1 174 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 COL21A1Q96P44 957 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 VPS35Q96QK1 796 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 WFDC6Q9BQY6 131 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 SLC6A16Q9GZN6 736 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 CORO2BQ9UQ03 480 aa23.32■■□□□ 1.32
SPTSSA-201ENST00000298130 TRBV4-1A0A0J9YWV2 114 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 CXCL10P02778 98 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 PPIBP23284 216 aaKnown RBP23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 CHMP24386 653 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 TEAD2Q15562 447 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 ATAD3BQ5T9A4 648 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 BRAT1Q6PJG6 821 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 STARD8Q92502 1023 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 CREBZFQ9NS37 354 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 CLEC2DQ9UHP7 191 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 OBSL1O75147 1896 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 A0A1W2PRB8 838 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 KPNA3O00505 521 aaPredicted RBP23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 RECKO95980 971 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 PTGER1P34995 402 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 SOX3P41225 446 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 TUBA1BP68363 451 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 TLE2Q04725 743 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 DEPDC1Q5TB30 811 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 LINC00299Q6ZSB3 139 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 TUBA1AQ71U36 451 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 TAGAPQ8N103 731 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 MINDY2Q8NBR6 621 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 OTUB1Q96FW1 271 aaPredicted RBP23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 NMNAT1Q9HAN9 279 aaPredicted RBP23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 DMRT3Q9NQL9 472 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 PLCXD1Q9NUJ7 323 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 FKBP14Q9NWM8 211 aa23.31■■□□□ 1.32
SPTSSA-201ENST00000298130 WWP2O00308 870 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 ALDH9A1P49189 494 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 C21orf58P58505 322 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 SLC35B4Q969S0 331 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 MGLLQ99685 303 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 ZSCAN5AQ9BUG6 496 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 BHLHE41Q9C0J9 482 aaPredicted RBP23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 DNAJC27Q9NZQ0 273 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 ATP11BQ9Y2G3 1177 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 ZNF197O14709 1029 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 TPST2O60704 377 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 ZNF30P17039 623 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 UGT2B10P36537 528 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 PIK3CBP42338 1070 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 LIM2P55344 173 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 PUM1Q14671 1186 aaKnown RBP eCLIP23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 CAMKMTQ7Z624 323 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 VN1R2Q8NFZ6 395 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.3■■□□□ 1.324e-9■■■■■ 108.8
SPTSSA-201ENST00000298130 IRF7Q92985 503 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 MAGEB10Q96LZ2 347 aaPredicted RBP23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 PIP5K1AQ99755 562 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 PCDHGA3Q9Y5H0 932 aa23.3■■□□□ 1.32
SPTSSA-201ENST00000298130 FFAR1O14842 300 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms