RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 GTF2H2Q13888 395 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 MYBPC3Q14896 1274 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 FAM219BQ5XKK7 198 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 MRM1Q6IN84 353 aaKnown RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 GTF2H2CQ6P1K8 395 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 EMBQ6PCB8 327 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 RPS27LQ71UM5 84 aaKnown RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 KRT78Q8N1N4 520 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 CA13Q8N1Q1 262 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 Q8NA96 180 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 TMEM52Q8NDY8 209 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 OR2L5Q8NG80 312 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 OR6Y1Q8NGX8 325 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 OR2W6PQ8NHA6 318 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 HUS1BQ8NHY5 278 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 RNF217Q8TC41 542 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 EPS8L3Q8TE67 593 aaKnown RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 GAL3ST3Q96A11 431 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 TBC1D20Q96BZ9 403 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 C8orf44Q96CB5 159 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 PHF21BQ96EK2 531 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 C11orf24Q96F05 449 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 FER1L6-AS2Q96M78 137 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 F2RL3Q96RI0 385 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 CITED4Q96RK1 184 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 BARD1Q99728 777 aaKnown RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 CRB3Q9BUF7 120 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 NPLQ9BXD5 320 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 ANKHQ9HCJ1 492 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 CPSF2Q9P2I0 782 aaKnown RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 OPTCQ9UBM4 332 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 LGALS13Q9UHV8 139 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 TMCO1Q9UM00 188 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 PPIEQ9UNP9 301 aaKnown RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 PCDHGB7Q9Y5F8 929 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 POLEQ07864 2286 aa8.62□□□□□ -1.03
HMGN1-201ENST00000288344 RP1L1Q8IWN7 2480 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-201ENST00000288344 PABPN1LA6NDY0 278 aaKnown RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ZNF860A6NHJ4 632 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 MAGEB17A8MXT2 336 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 GOLGA8RI6L899 631 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 NDUFB5O43674 189 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ALOX12BO75342 701 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 HPP00738 406 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 PROCP04070 461 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 FHP07954 510 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ATP5A1P25705 553 aaKnown RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 EEF1DP29692 281 aaKnown RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 BSGP35613 385 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 CD97P48960 835 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 RRADP55042 308 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 HERVK_113P63132 956 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 OLR1P78380 273 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 BTG2P78543 158 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 RGS1Q08116 209 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 AIMP2Q13155 320 aaKnown RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 TUBB8Q3ZCM7 444 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 GGTA1PQ4G0N0 100 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 TOR1AIP1Q5JTV8 583 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ZNF678Q5SXM1 525 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 NIPAL1Q6NVV3 410 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 LETMD1Q6P1Q0 360 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 MED27Q6P2C8 311 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 KLC3Q6P597 504 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ATG14Q6ZNE5 492 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 QSOX2Q6ZRP7 698 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 LANCL3Q6ZV70 420 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 NDUFAF7Q7L592 441 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 TAOK1Q7L7X3 1001 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ANKRD37Q7Z713 158 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 TRABD2AQ86V40 505 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 SCUBE1Q8IWY4 988 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ARMC10Q8N2F6 343 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 GALNT16Q8N428 558 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 BANPQ8N9N5 519 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 NFAM1Q8NET5 270 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 MYRIPQ8NFW9 859 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 C9orf43Q8TAL5 461 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ZCCHC10Q8TBK6 192 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 EXT2Q93063 718 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 L3HYPDHQ96EM0 354 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 PEX11GQ96HA9 241 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 NPAS2Q99743 824 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ERVK-6Q9BXR3 956 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ROPN1BQ9BZX4 212 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 REXO4Q9GZR2 422 aaKnown RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 C12orf65Q9H3J6 166 aaKnown RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 NOL11Q9H8H0 719 aaKnown RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ROPN1Q9HAT0 212 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 ZNF71Q9NQZ8 489 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 MKS1Q9NXB0 559 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 HCN3Q9P1Z3 774 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 C5AR2Q9P296 337 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.61□□□□□ -1.03
HMGN1-201ENST00000288344 TBK1Q9UHD2 729 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 DCDC2Q9UHG0 476 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 MKL2Q9ULH7 1088 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 DAPP1Q9UN19 280 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 IKBKGQ9Y6K9 419 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 V9GYY5 206 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms